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SCNpilot_expt_1000_bf_scaffold_23014_3

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_14

near complete RP 44 / 55 BSCG 45 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1836..2711)

Top 3 Functional Annotations

Value Algorithm Source
Channel protein, hemolysin III family n=1 Tax=Frankia sp. CN3 RepID=G6H9A3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 280.0
  • Bit_score: 210
  • Evalue 3.10e-51
hemolysin III family channel protein; K11068 hemolysin III similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 201.0
  • Bit_score: 207
  • Evalue 8.20e-51
Channel protein, hemolysin III family {ECO:0000313|EMBL:ADP78752.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 201.0
  • Bit_score: 207
  • Evalue 3.70e-50

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGTCATGCCGTTTGCCGGGCTCCAGGCGCCTGATCGCTACGATTGGGGCCGTGAGCCAGGGACCAAAAAACGCACGCGAGAAGGCCGCGCAGGCGAGGGAAAACGCGGTCACCCGCGCGACCGCCGCCCGCGACGGGGCAGTCGAGCGGGCCGGCCAGGCTCGCGACGCCGCAGTCGAGCGGGCCGGGGTGGCCCGGGACGCGGCGGTGGAGATGGCCGTGGGCGCCCGCGACGCCGCGGTCGAACGGGCCGTCGCGGTCAAGGACTCCGCCACCGAGTCGATCAAGGCCATGAAGCCGAAGTTCCGTGGGGTCTCGCACGAGTGGGCCTTCTTCCTCTCGCTCGGCCTCGGCATCTCACTGCTGCTGATCGCCGACACCCCGAAGAAGTCACTGGCGGTCGGCATCTACATCAGCACCCTTTGCGCCCTTTTCGGCACCAGCGCCCTCTACCACCGGATCAACTGGAAGACGGTCAGGGCGCGGATGCTGATGCGCCGGCTCGACCACTCGATGATCTTCCTGCTGATCGCCGGCACGGTGACGCCGTTCGCCCTGTTGAACATGACCGGGACCTGGTCGACGGCGATCCTGATCGCCGTCTGGTCGGCGGCCGCCCTCGGGATCGTGGTCGAGTTGCTCTGGATCCACTCGCCGAAATGGGTCAGTGCCCTCATGTACGTCGCGGTGGGTTGGATCGGCGCCGTCGCCTTCCCCCAGATCGTCGGCACCGCCGGGGTCTGGGCCGGGCTGCTGATCGCCACCGGCGGGATCCTCTACACGGTAGGTGCGGTGGTCTACGCGACCGGCCGGCCCAACCCCAGCCCGACCTACTTCGGCTACCATGACGCGGCCGTCGCCATGTTCGCCCTCTGA
PROTEIN sequence
Length: 292
MSCRLPGSRRLIATIGAVSQGPKNAREKAAQARENAVTRATAARDGAVERAGQARDAAVERAGVARDAAVEMAVGARDAAVERAVAVKDSATESIKAMKPKFRGVSHEWAFFLSLGLGISLLLIADTPKKSLAVGIYISTLCALFGTSALYHRINWKTVRARMLMRRLDHSMIFLLIAGTVTPFALLNMTGTWSTAILIAVWSAAALGIVVELLWIHSPKWVSALMYVAVGWIGAVAFPQIVGTAGVWAGLLIATGGILYTVGAVVYATGRPNPSPTYFGYHDAAVAMFAL*