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SCNpilot_expt_1000_bf_scaffold_30345_1

Organism: SCNpilot_BF_INOC_Solirubrobacterales_68_14

near complete RP 44 / 55 BSCG 45 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 1..315

Top 3 Functional Annotations

Value Algorithm Source
RC215 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVX5_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 104.0
  • Bit_score: 123
  • Evalue 1.80e-25
RC215 {ECO:0000313|EMBL:AAN05288.1}; TaxID=185588 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. PR1b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 104.0
  • Bit_score: 123
  • Evalue 2.50e-25
ABC spermidine/putrescine transporter, inner membrane subunit; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 101.0
  • Bit_score: 110
  • Evalue 2.90e-22

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Taxonomy

Ruegeria sp. PR1b → Ruegeria → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CCCCACAACCTGATCGAGGCGAGCAAGGATCTCGGCGTCAGCAGCTTCGCAACCTTCCGTAAAATCGTCCTGCCGCTGTCGCTGCCGGGGGTGGTAGCCGGTGCCACCTTCACAATGGGGCTGTCCAGCGGCGATTTCGTCGCGCCTATGCTCGTTGGAGGCGAGAGTGACGTGATGATTGCCAACCAGATCTACAGCCAGTTCGGGGCCACGAACAACTGGCCGCTGGGCTCGGCCATAGCCTTTGTCTTGCTGGCCTTCGTCGCGGTCCTGGTGTGGATCTCCACTGCGGCCGAGAAGAGGGAGCAGATCTGA
PROTEIN sequence
Length: 105
PHNLIEASKDLGVSSFATFRKIVLPLSLPGVVAGATFTMGLSSGDFVAPMLVGGESDVMIANQIYSQFGATNNWPLGSAIAFVLLAFVAVLVWISTAAEKREQI*