ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_4052_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 1264..2478

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC branched-chain amino transporter, periplasmic binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMI8_TISMK similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 402.0
  • Bit_score: 387
  • Evalue 1.50e-104
putative ABC branched-chain amino transporter, periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 402.0
  • Bit_score: 387
  • Evalue 4.70e-105
Putative ABC branched-chain amino transporter, periplasmic binding protein {ECO:0000313|EMBL:AFK53976.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 402.0
  • Bit_score: 387
  • Evalue 2.10e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tistrella mobilis → Tistrella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCGCATTTTGGGAGGGGCCGTTTCCATAGCGGCATTGATGCTGGCGACCGTTTGCGCGCAGGCGCAGATCGCCAATAAAACTGTCAAGATCGGCGTCCTAACGGACCTGTCCGGCGGTTACGAACAAAACTCCGGCCACGGCTCGGTCGAAGCGGCACGCATGGCCGTCGAGGAATTCGGCGGCAAGATCGGCGACGCGACTATTTCGGTTCTCGCCGGCGACCATCAGAACAAGCCTGATGTCGGCGTGTCGATCGCCAATCGCTGGTTCGATGTCGACAAGGTCGACATGGTCACCGATCTGGTGAACTCCGCCGTCGGCTTCGCCGTGCTCGACGCCGCCAAGGCGAAGAACAAAATGGGGATGCTGACGAGCGCCGGCTCGGCCGACTTCACCGGCAAGGCCTGCGCGCCCGACAATTCGGTGCATTGGGTCTATGACACCTATCAAATTGGCCGGACGATCGGCCAAGCAGTGCCGCAGCTCGGCAACAAATGGTTCTTCATCACCGCCGATTACGCCTTCGGCATCGCGCTGGAACAAGGCGTCACCGCCGCCATCAAGCCGGCTGGCGCCACGGTCGTCGGCTCGGTGCGCGCGCCGCTCGGCACCACCGACTTCTCCTCCTTCGTGCTGCAGGCGCAGGCTTCGAAAGCCGACGTGGTGGCGCTCAACAATGGCGGCGACGACGGCATCAATTCGATGAAGGCGGTGCGCGAGTTCGGCCTTCTCGCCGGCGGCATGAAGGTCGCCGCGCTCGGCCTCGATGCGCTGCCGGCGCTGAAGAGCGCCAGCCTGGAAGTGGCGCAGGGCAGCATGTTCGCCACCACCTGGTATCCGGAAATAAACCCTGAGGCGCAGGCGTTCATGAAGAAATTCATCGAGCGCCGCAAGACCGCGCCCGGCCCCTTCCAGGTCGGTACCTATTCGGCGGTTCTCAACTATCTGAAAGCGGTTCAGGCGACCAATTCGACCGATCCGAAGACGGTCATCGCCAAGATGCGGGCAACGCCGGTGAAGGACGCCTTCACCAACAATGGCGTGCTGCGTGCCGATGGCCGCATGGTCCACGACGTCTATCTCGTGCAGGTGAAATCGCCGCAGGAGTCGAAGAGCGAGTGGGACATGCTGAAGGTGATCAAGGAGATGAAGGGCGAGGACGTGTTCCGCCCGCTCTCCGACAACGCCTGCCCGGCCCTCGCCAAGAACTAA
PROTEIN sequence
Length: 405
MRILGGAVSIAALMLATVCAQAQIANKTVKIGVLTDLSGGYEQNSGHGSVEAARMAVEEFGGKIGDATISVLAGDHQNKPDVGVSIANRWFDVDKVDMVTDLVNSAVGFAVLDAAKAKNKMGMLTSAGSADFTGKACAPDNSVHWVYDTYQIGRTIGQAVPQLGNKWFFITADYAFGIALEQGVTAAIKPAGATVVGSVRAPLGTTDFSSFVLQAQASKADVVALNNGGDDGINSMKAVREFGLLAGGMKVAALGLDALPALKSASLEVAQGSMFATTWYPEINPEAQAFMKKFIERRKTAPGPFQVGTYSAVLNYLKAVQATNSTDPKTVIAKMRATPVKDAFTNNGVLRADGRMVHDVYLVQVKSPQESKSEWDMLKVIKEMKGEDVFRPLSDNACPALAKN*