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SCNpilot_expt_1000_bf_scaffold_4052_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 3302..4009

Top 3 Functional Annotations

Value Algorithm Source
histidinol dehydrogenase n=1 Tax=Loktanella hongkongensis RepID=UPI00035EC65B similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 234.0
  • Bit_score: 313
  • Evalue 2.10e-82
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:EYD73632.1}; TaxID=1122180 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella hongkongensis DSM 17492.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 234.0
  • Bit_score: 313
  • Evalue 2.90e-82
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 230.0
  • Bit_score: 308
  • Evalue 1.60e-81

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Taxonomy

Loktanella hongkongensis → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAGTGATCAACGCGTTCTGACGGTCGACAACGTTACCGGCCACTATGGCGATTCGCACATTCTGCATGGCGTCTCCATGCATGTGAACGAGGGCGAAGTCGTCACCATCATCGGCCGCAACGGCGCCGGCAAGACCACTTTGCTGCGTGCCATCATGGGCATTCTCACCAAGCGCGGCGGCTCGATCGTCGTGCGCGGACAGGAGACCATCGCTCTACCGCCCGAGCGCATCGCCCGGCTCGGCATCGGCTACGTGCCGGAAGAGCGCGGCATCTATGCGACGCTCGATGTCACCGAAAACCTCATGTTGCCGCCGCGTGTCGCGGCCGGTGGCATGAGCCTCGACGACATCTACAAACTGTTCCCCAATCTTTACGAGCGGCGGCGCAGCCCCGGCACGCGCCTGTCGGGCGGCGAACAGCAGATGCTGGCCATCGCCCGCGTGTTGCGCACGGGCGCGAAATTCCTACTACTCGACGAGCCGACCGAGGGTCTCGCGCCTGTCATCGTGCAGCAGATCGGCGCCACAATCGAACTGATGAAACGGCAGGGCATGACGCTCATTCTGGTGGAGCAGAATTTCCGCTTCGCCTCGCGCCTCGCCGACCGTCATTATGTGATGGAACACGGTCAAATCGTCGATGTGATCGATCGCGCGCAGGTGCAGGCGCGCATGGATTCCATCAAATCCTATCTCGGCATCTAG
PROTEIN sequence
Length: 236
MSDQRVLTVDNVTGHYGDSHILHGVSMHVNEGEVVTIIGRNGAGKTTLLRAIMGILTKRGGSIVVRGQETIALPPERIARLGIGYVPEERGIYATLDVTENLMLPPRVAAGGMSLDDIYKLFPNLYERRRSPGTRLSGGEQQMLAIARVLRTGAKFLLLDEPTEGLAPVIVQQIGATIELMKRQGMTLILVEQNFRFASRLADRHYVMEHGQIVDVIDRAQVQARMDSIKSYLGI*