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SCNpilot_expt_1000_bf_scaffold_4267_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(4898..5551)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003764118 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 217.0
  • Bit_score: 357
  • Evalue 1.20e-95
  • rbh
Putative capsule polysaccharide export ATP-binding protein {ECO:0000313|EMBL:GAK71872.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 217.0
  • Bit_score: 309
  • Evalue 3.90e-81
putative RkpS/KpsT/CtrD/VexC-like capsular polysaccharide export, ATP-binding component similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 217.0
  • Bit_score: 305
  • Evalue 9.70e-81

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGATACAACTCGATAAAGTTTTTAAGTTTTACAAAAACAGCGGCTATACGAAAATCGTCCTGGACAATGCTTCAGTGACATTTCAAAGCGGCCGCTCGTATGCCTTACTCGGAGTGAACGGCGCCGGAAAGTCAACAACTATGCGGCTTATTGCCGGCACCGAGTTGCCAAACTCCGGCAGAATAAGACGCTCGGTGAGAGTTTCTTGGCCGCTTGGGTTTTCAGGAGGCTTTCATCCGGCCATGACAGGTCGCGAAAATGTCAAGTTTGTAGCTCGGGCTTATGGCGAAGATGTTTATCGAGTTTTGCGCTTTGTCGAGGATTTCGCAGAATTGGGAGATTACATAGACGTTCCGTTTAAAACTTATTCTTCTGGAATGATGGCCCGATTAGCATTTGGTCTTTCTATGGCCATCGAATTTGAATGTTATTTAATTGATGAAGTTACCGCAGTCGGTGATGCGCGCTTTCAGGCTCGCTGCAAGGCTGTCTTTGAAGAGAGACGAGCTAATGCTGATTTAATTGTAGTTTCGCATTCTATGGACACCGTAAAATTGTATTGTGATCTTGGAGCCGTTTTGGTTGATGGGCAAATACTGATGTATGATTCAGCAGACAAAGCGATCGAAGCCTATAATCGTTTGAATCGATGA
PROTEIN sequence
Length: 218
MIQLDKVFKFYKNSGYTKIVLDNASVTFQSGRSYALLGVNGAGKSTTMRLIAGTELPNSGRIRRSVRVSWPLGFSGGFHPAMTGRENVKFVARAYGEDVYRVLRFVEDFAELGDYIDVPFKTYSSGMMARLAFGLSMAIEFECYLIDEVTAVGDARFQARCKAVFEERRANADLIVVSHSMDTVKLYCDLGAVLVDGQILMYDSADKAIEAYNRLNR*