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SCNpilot_expt_1000_bf_scaffold_3348_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(3..593)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase id=12552939 bin=BDI species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 195.0
  • Bit_score: 112
  • Evalue 4.50e-22
Tax=GWF1_Sphingomonadales_63_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 195.0
  • Bit_score: 165
  • Evalue 1.10e-37

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Taxonomy

GWF1_Sphingomonadales_63_6_curated → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGCTTGTCGCCGAGCACTTGAATTTCGATATGGCGCGGATTGACGATGAACTTTTCGATGAAGACGCGATCGTCACCAAAGGACGACAGCGCTTCGGACTTGGCGCGCTCGAACCCTTCCGCCACTTCATCGCGCGCATGGGCAATGCGCATGCCTTTGCCGCCGCCACCGGCCGACGCCTTGATCATCACCGGATAGCCGATCTCGTCGGCGATCTTCACCGCATGTTCCGGGCTATCGATGACGCCGAGATAGCCCGGCACGGTCGAGACCTTGGCGGCATTGGCGAATTTCTTCGACTCGATCTTGTCGCCCATCGCCGCGATGGCGCGCGGATTGGGTCCGATGAAGGTGCTGCCAGCCTTCTTCAGCGCCTAGGCAAAAGCTTCACGCTCGGAAAGAAAGCCAGAGCCCGGCTGAACGGCCTCGGCCCCGGTCTGCTGACAGGCGGCCACGATCCGATCGATGACGAGATAAGATTCCGCGGCAGGCGCCGGGCCGATGTGGACGGCCTCGTCGGCCATCGCCACATGGAGCGCGTCGCGATCGGCGTCCGAATAGACCGCCACCGTGGCAATTCCCATACGGCG
PROTEIN sequence
Length: 197
VLVAEHLNFDMARIDDELFDEDAIVTKGRQRFGLGALEPFRHFIARMGNAHAFAAATGRRLDHHRIADLVGDLHRMFRAIDDAEIARHGRDLGGIGEFLRLDLVAHRRDGARIGSDEGAASLLQRLGKSFTLGKKARARLNGLGPGLLTGGHDPIDDEIRFRGRRRADVDGLVGHRHMERVAIGVRIDRHRGNSHTA