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SCNpilot_expt_1000_bf_scaffold_3683_15

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(12950..14587)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036EE1B5 similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 548.0
  • Bit_score: 728
  • Evalue 3.70e-207
Peptide/nickel transport system substrate-binding protein {ECO:0000313|EMBL:ERF84472.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 548.0
  • Bit_score: 701
  • Evalue 1.20e-198
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 548.0
  • Bit_score: 681
  • Evalue 2.80e-193

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1638
ATGCAGGTGCGCAAGGGACCGTTCTTCGCCCAAGAAGGGGACTTCTCCTCCGCCGGTGCCGTCCATCTCACCTATATCGACAAGGTCGACAAAACACTGATCCAGAAAACGATCGGAAGTTTTGGGTACTTCAGGGCGTTGGGGATCACCTCAACCAAAGTCGGGCAGGGCAATCTGCTCGTCGCCGCCGATGCCAATATCTACAACGGCCCCTGGGTGGTGCCCGACCGGGTGCGCAAGTTCAATGGCGTCATTCGCTACAGCCAGGGCGACGAGAGCAACGGCTTTTCCGTCACCGGCATGGCCTATTCCAACCGCTGGAATTCTACCGATCAGATCCCCGAGCGGGCGGTGGCGCAAGGCTTGATCGGCCGCTTCGGCACGCTTGATCCGACCGACGGCGGCAATGCCAGCCGCCTGTCGCTGTCCGGGCGTTGGAGCCGTTCGGATGCCTACAGCGACACCCGCGTCAACGCCTATGTCAATCTGAATCTCTACAATAACTTCACTTACTTCCTCGATGACCCTGTAACCGGCGATCAATTCCGCCAGTTCGACCGTCGTACGGTGACCGGCTTCAACGCCAGCCATACGTTCAAATCGACTATCGCCGGCCTGCCGATGGAGAACGAATTCGGCATCCAGGGCCGGCTCGATCAGATCAACGTCGGGCTTGAAAACACCATCCAGCGCATCACCACCAATGTCGTTCGCCATGACACGGTGCGCGAGGGCAACATCGCCTTCTATGGCGAGAACCGCGTCCGCTGGACCGACTGGCTGCGCACCTCCATAGGTCTGCGCGGCGACCTTTACGACGCCAGCGTCCGCTCGGATACGCTGGTCAATTCCGGCCATGTTCGCGACGGCATCGTCAGCCCGAAGTTTGGCCTCGTGCTCGGTCCTTGGGCGAGGACGGAATTCTTCTTCAACGCCGGGCGCGGCTTCCACAGCAATGACGCGCGCGGTTCCACCATCACCGTCGACCCCGCAGACAAGGTGACGCCGGTGGCGCGCACGCCGCTTTTGGTGCGCGCCAACGGGGTGGAGATCGGGCTGCGCACCCGGCTGATCGAGGGGCTCGACTCCTCCGTCAGCCTGTTCGGTCTCGACTATGCCTCGGAAATTCTTTTCGTCGGCGATGCCGGCACCACGGAGGCGAGCCGGCCGAGCCGGCGCTACGGCGTCGAGTTCACCAACCGCTACAAGTACAGTTCCTGGCTGTCGTTTGATTTCGATTTCACCTGGTCGCATGCGCGGTTCCGCAACTATGATCCGGTTGGTCCCTACATCCCTGGCGCGCCGGGCATCATCGCGGCGGCAGGCGTGAACTTCGGCGAGGAGAAGGGCTGGTTCGGCGGTTTGCGTCTGCGCTATTTCGGCCCGCGCCCGCTGATCGAGGACAATACGGTGGCGTCGCGCCCGACGACTCTGGTCAATGCCCGTGTCGGCTATCGCTTCGACAACGGCATTTCCGTGCAGCTTGATGCCTTCAATCTGTTCAACGCCAAGGCGAGCCAGATCGACTACTATTATACGTCGCGTCTGCCGGGCGAACCTGCTGCGGGCATTGGCGACCGGCATTTCCATCCGGTCGAACCGCTGGCGGTGCGCCTGACCGTCGCTGGGCAGTTTTAG
PROTEIN sequence
Length: 546
MQVRKGPFFAQEGDFSSAGAVHLTYIDKVDKTLIQKTIGSFGYFRALGITSTKVGQGNLLVAADANIYNGPWVVPDRVRKFNGVIRYSQGDESNGFSVTGMAYSNRWNSTDQIPERAVAQGLIGRFGTLDPTDGGNASRLSLSGRWSRSDAYSDTRVNAYVNLNLYNNFTYFLDDPVTGDQFRQFDRRTVTGFNASHTFKSTIAGLPMENEFGIQGRLDQINVGLENTIQRITTNVVRHDTVREGNIAFYGENRVRWTDWLRTSIGLRGDLYDASVRSDTLVNSGHVRDGIVSPKFGLVLGPWARTEFFFNAGRGFHSNDARGSTITVDPADKVTPVARTPLLVRANGVEIGLRTRLIEGLDSSVSLFGLDYASEILFVGDAGTTEASRPSRRYGVEFTNRYKYSSWLSFDFDFTWSHARFRNYDPVGPYIPGAPGIIAAAGVNFGEEKGWFGGLRLRYFGPRPLIEDNTVASRPTTLVNARVGYRFDNGISVQLDAFNLFNAKASQIDYYYTSRLPGEPAAGIGDRHFHPVEPLAVRLTVAGQF*