ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6445_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 460..2064

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination protein NusA n=1 Tax=Rhodovulum sp. PH10 RepID=J6UA71_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 545.0
  • Bit_score: 845
  • Evalue 2.60e-242
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 545.0
  • Bit_score: 845
  • Evalue 3.70e-242
nusA; transcription elongation protein NusA; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 536.0
  • Bit_score: 840
  • Evalue 3.50e-241

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGGCTGTCAGCGCCAACCGGCTCGAACTGTTGCAGATCGCCGACGCGGTCGCGCGCGAGAAAGCGATTGATCGCGTCATCGTCATCGGCGCGATGGAAGATGCCATCGCCAAGGCCGCGCGCTCGCGTTACGGCGCCGAGACCGACGTGCATGCCGAGATCGATCCGAAGAACGGCGACCTCCGCCTCACCCGCCACATGCTGGTGGTCGAGACTGTCGAGAATCCGTCGAACCAGATCACCGTGGAAGACGCGCGCCGCCGCCATCCGGCCGCGGAGGTCGGCGACGTGATCGCCGATCCGCTGCCGCCGCTGGAATACGGCCGCATCGCTGCGCAGTCGGCGAAGCAGGTGATCGTGCAGAAGGTGCGCGAGGCCGAACGCGACCGGCAATATGCGGAATACAAGGACCGCATCGGCGAGATCGTCAACGGTGTCGTCAAGCGCGTTGAATACGGCAACGTGGTGGTCGATCTCGGCCGTGGTGAAGCCATCATTCGGCGCGACGAGATGCTGCCGCGTGAAACGCTGCGCAACGGCGACCGGGTGCGCGCCTATATCTACGACGTGCGTCGCGAGCCACGCGGCCCGCAGATTTTCCTGTCGCGCACACATCCGCAGTTCACCGCCAAGCTGTTCGCCCAGGAAGTGCCGGAAATCTATGACGGCATCGTCGAGGTGAAGGCGGTCGCCCGCGATCCCGGCTCGCGCGCCAAGATCGCCGTGATCTCGCGCGATTCGTCGGTCGATCCGGTCGGCGCCTGCGTCGGCATGCGCGGTTCGCGCGTGCAGGCCGTGGTCAACGAGCTGCAGGGCGAGAAGATCGACATCATTCCGTGGTCGGCCGACACGCCGACCTTCGTCGTCAACGCGCTTGCGCCCGCTGAAGTCGCCAAGGTCGTGCTCGACGAGGACAAGAACCGTATCGAGGTGGTGGTGCCAGACGCGCAGCTTTCGCTCGCCATCGGCCGCCGCGGCCAGAACGTGCGTCTCGCCTCGCAGCTCACCGGTTGGGATATCGACATCCTCACCGAGGCCGAGGAATCCGAGCGCCGTCAGAAGGAATTCGTCGAACGCACCAACACGTTCATGAATGCCCTCGACGTCGACGAAGTCGTCGGTCAGCTCCTGGCCTCGGAAGGCTTCCGTTCGGTGGAAGAACTGGCCTTCGTCGAAGTGTCGGAACTGGCTTCGATCGAAGGTTTCGACGAGGAGACGGCGCAGGAAATTCAGAATCGCGCCCGCGAACATCTCGCCCAGATCGAGGCCGCCAACGATGCACGGCGCAAGGAACTCGGCGTCGCCGACGAAATGCGCGAGATCGACGGCCTTACCTCCGCCATGCTGGTCAAGCTCGGCGAGAACGAGGTCAAGACGATTGAAGACCTGGCCGGTTGCGCCACCGACGATCTCGTCGGCTGGAGCGAGCGCAAGGACGGCGAAACGACGAAACATGCCGGCTATTTCGATGGCATCGAAATTTCCCGCGAGGAGGCTGAAGCCCTGATCATGAATGCGCGCGTCAAGGCGGGCTGGATCGAAGCGCCGGTGGAAGAGGAGGCTCAAGAGGCCACCGACGCCGACGATTCGGCGCAGGCCAGCTAA
PROTEIN sequence
Length: 535
MAVSANRLELLQIADAVAREKAIDRVIVIGAMEDAIAKAARSRYGAETDVHAEIDPKNGDLRLTRHMLVVETVENPSNQITVEDARRRHPAAEVGDVIADPLPPLEYGRIAAQSAKQVIVQKVREAERDRQYAEYKDRIGEIVNGVVKRVEYGNVVVDLGRGEAIIRRDEMLPRETLRNGDRVRAYIYDVRREPRGPQIFLSRTHPQFTAKLFAQEVPEIYDGIVEVKAVARDPGSRAKIAVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSADTPTFVVNALAPAEVAKVVLDEDKNRIEVVVPDAQLSLAIGRRGQNVRLASQLTGWDIDILTEAEESERRQKEFVERTNTFMNALDVDEVVGQLLASEGFRSVEELAFVEVSELASIEGFDEETAQEIQNRAREHLAQIEAANDARRKELGVADEMREIDGLTSAMLVKLGENEVKTIEDLAGCATDDLVGWSERKDGETTKHAGYFDGIEISREEAEALIMNARVKAGWIEAPVEEEAQEATDADDSAQAS*