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SCNpilot_expt_1000_bf_scaffold_6445_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 6089..6994

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 301.0
  • Bit_score: 446
  • Evalue 6.40e-123
  • rbh
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 301.0
  • Bit_score: 446
  • Evalue 2.80e-122
tRNA pseudouridine synthase B n=1 Tax=Methylosinus sp. LW4 RepID=UPI000365AB51 similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 301.0
  • Bit_score: 453
  • Evalue 1.70e-124
  • rbh

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Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAACGCCCCGAAATCGAAGCGCGTCGAGGTCAATGGCTGGATCATCCTCGACAAGCCCATCGGCATGACCTCGACCCATGCGGTGTCGCGCCTGAAGCGCATCTTCAATGCGAAGAAAGCGGGCCATGCCGGCACGCTTGATCCGCTGGCCTCCGGTCTTCTGCCCGTCGCCTTCGGCGAAGCGACCAAGACCGTGCCCTTCGTGCAGGATGGCGAGAAGGCCTATCGCTTCACCGTCAAATGGGGCACCGAAACCGACAGCGACGATGCCGACGGCACGCCGGTGCGCCATTCCGAGGCGCGCCCGACGCGCGAAGAGGTGGAAGCGCAACTGCCGCGCTTCATCGGCACGATCATGCAGACGCCGCCGGCCTATTCGGCGATCAAGATCGACGGCGAGCGCGCTTACGATCTGGCGCGTGATGGCGCCACCTTCGAGATTGCGCCGCGCGAGGTGACCATTCACGCTCTGCGTCTCGTCTCGTCGACATCAGAGGAAGCCGTGCTCGAAGCCGAATGCGGTAAGGGCACTTATGTGCGCGCCATCGCGCGCGATCTTGGCCGCCTGCTCGGCTGCCTCGGTCATGTCACGGCGCTGCGCCGCACCCGTGTCGGTCCCTTCTATGAAGACGATGCCGATCCGTTGGCGGAGATCGAAGAGGCGGGCGTCGAGGCGCCGGCCTTCATGCTGTCGGTGGAAGCGGGCCTGACGGAACTGCCCTGCGTCGTCGTCGACCGCGATGGCGCCGCGCGCCTGCGCCGTGGCCAGTCGTTGATTCTGCGCGGCCGCGATGCCCCGGCTGAGGGTGTCGCCTACGCCGCCTGCGGCGGCGTGCCGGTGGCTTTCGGTGCGGTTTCGCACGGCGAGCTGGTGCCGAGCCGCGTATTCAATCTGCCGTTCTAA
PROTEIN sequence
Length: 302
MNAPKSKRVEVNGWIILDKPIGMTSTHAVSRLKRIFNAKKAGHAGTLDPLASGLLPVAFGEATKTVPFVQDGEKAYRFTVKWGTETDSDDADGTPVRHSEARPTREEVEAQLPRFIGTIMQTPPAYSAIKIDGERAYDLARDGATFEIAPREVTIHALRLVSSTSEEAVLEAECGKGTYVRAIARDLGRLLGCLGHVTALRRTRVGPFYEDDADPLAEIEEAGVEAPAFMLSVEAGLTELPCVVVDRDGAARLRRGQSLILRGRDAPAEGVAYAACGGVPVAFGAVSHGELVPSRVFNLPF*