ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6445_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 8012..10177

Top 3 Functional Annotations

Value Algorithm Source
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000313|EMBL:CCJ07215.1};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 715.0
  • Bit_score: 1242
  • Evalue 0.0
pnp; polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 715.0
  • Bit_score: 1242
  • Evalue 0.0
  • rbh
polynucleotide phosphorylase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003791D6A similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 715.0
  • Bit_score: 1252
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2166
ATGTTCGAAATTCATCGCGAAACCCTGGACTGGGCCGGGCGCAAGCTCGTTCTGGAAACCGGCCGCATCGCGCGCCAGGCCGACGGCGCCGTTTTCGCCACCTGGGGCGAAACCTCCGTTCTGGCCACCGTCGTGTCCGCCAAGGCGCCCAAGCCTGGCGTCGATTTCTTCCCCCTCACCGTCAACTATCAGGAAAAGGCCTTCGCGGCCGGCCGCATTCCTGGCGGCTATTTCAAGCGTGAAGGCCGTCCGTCGGAAAAGGAGACCTTGGTCTCCCGCCTGATCGACCGTCCGATCCGCCCGCTGGTTCCGGAAGGCTATCGCCACGACACCCAGGTCGTCGTCACCGTGCTCTCGCACGATCTCGAAAACGATCCGGATGTGCTGGCGATGGTGGCGGCCTCCGCCGCGCTCACCATTTCCGGCATTCCCTTCATGGGCCCCATCGGTGGCGCCCGCGTCGGCTGGGTCAAGGGCGAGCTGAAGCTCAACCCGACCATCGATGAGATGAAGGAATCCGGTCTCGATCTCGTTGTCGCCGGCACGCAGGATGCGGTGCTGATGGTCGAATCCGAAGCGCAGGAACTCTCCGAAGAGGTCATGCTCGAAGCGGTGATGACCGGCCATCGCGGTTTCCAGCCGGTGATCGACGCGATCATCCGCCTGGCCGAGAAGGCCGCCAAGGAGCCGCGCGATCTCAAGGTCGTCGACAAATCCGATGTCGAAGCGGCCGTCAGCCAGATCGCTGAAGCCGAACTGCGCGAAGCCTATAAGAACACCGTCAAGCAGCTGCGCTACGCCGCTGTCGATGCGGTGAAGGCGAAGGTCAACGCCGCTCTGCTGCCGGAAGGCCAGGAGCCGAAATTCGACAAGCAGAAGGTCGGCGAAGCCTTCCACGATCTGCAGGCGAAGGTCGTGCGCGGAAACATTCTCGACACCGGCGTGCGTATCGACGGCCGCGACGTGAAGACCGTGCGTCCGATCCTGGCGCAGGTCGGCGTTCTGCCGCGCACGCACGGCTCGGCGCTGTTTACCCGTGGCGAGACGCAGGCTTTGGTCGTTGCCACGCTCGGCACCGGCGAAGACGAGCAGTTCATCGATTCGCTGGAAGGCACCTACAAGGAGCGCTTCCTGCTCCACTACAACTTCCCTCCCTACAGCGTCGGTGAAACCGGCCGCATGGGCTCGCCCGGCCGCCGCGAAATCGGCCACGGCAAGCTCGCCTGGCGCGCCATTCGCCCGATGCTGCCGACGGCGGCGGAATTCCCCTACACGATCCGCGGCGTCTCGGAGATCACCGAGTCGAACGGCTCCTCGTCGATGGCGACCGTTTGCGGTTCGTCGCTGGCGCTGATGGATGCCGGCGTGCCGCTGAAGCGGCCGACCGCCGGTATCGCCATGGGTCTCATCCTGGAAGGCGAGCGCTTCGCGGTGCTCTCCGATATTCTCGGTGACGAGGACCATCTCGGCGACATGGACTTCAAGGTGGCGGGCACCGAACAGGGCGTCACCTCGCTGCAGATGGACATCAAGATCGCCGGCATCACCGAAGAGATCATGAAGGTCGCTCTCGGTCAGGCGAAGGATGGCCGCTTGCACATCCTCGGCGAGATGTCGAAGGCGCTGAACACGGCCCGTGCCGAGCTCGGCGAATTCGCGCCGCGCATCGAAACGATGAAGATCCCGACCGACAAGATCCGTGAAGTGATCGGCACCGGCGGCAAGGTGATCCGCGAGATCGTCGAGAAGACCGGCGCCAAGGTCAACATCGAGGACGACGGCACCGTGAAGATCGCCTCGTCCGATGGCAATTCGATCAAGGCGGCGATCAACTGGATCAAGTCGATCGCGTCCGATCCGGAAGTCGGCCAGATCTACGAAGGCACCGTGGTCAAGACCATGGAATTCGGCGCTTTCGTCAACTTCTTCGGCTCGAAGGACGGTCTCGTTCACATCTCGCAGCTCTCCAAGCAGCGCGTGCAGAAGACCACCGACGTCGTCAAGGAAGGCGACAAGGTGAAGGTGAAACTGCTCGGCTTCGACGATCGCGGCAAGGTGCGTCTGTCCATGCGCGTGGTCGATCAGGCGACGGGTGAAGATCTGGAAGCCAAGGAAGCGGCTGAACGCAAGGCTGCGGCCGCCGACGAACCGGCTGCCGGCGAATAA
PROTEIN sequence
Length: 722
MFEIHRETLDWAGRKLVLETGRIARQADGAVFATWGETSVLATVVSAKAPKPGVDFFPLTVNYQEKAFAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLVPEGYRHDTQVVVTVLSHDLENDPDVLAMVAASAALTISGIPFMGPIGGARVGWVKGELKLNPTIDEMKESGLDLVVAGTQDAVLMVESEAQELSEEVMLEAVMTGHRGFQPVIDAIIRLAEKAAKEPRDLKVVDKSDVEAAVSQIAEAELREAYKNTVKQLRYAAVDAVKAKVNAALLPEGQEPKFDKQKVGEAFHDLQAKVVRGNILDTGVRIDGRDVKTVRPILAQVGVLPRTHGSALFTRGETQALVVATLGTGEDEQFIDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAAEFPYTIRGVSEITESNGSSSMATVCGSSLALMDAGVPLKRPTAGIAMGLILEGERFAVLSDILGDEDHLGDMDFKVAGTEQGVTSLQMDIKIAGITEEIMKVALGQAKDGRLHILGEMSKALNTARAELGEFAPRIETMKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKIASSDGNSIKAAINWIKSIASDPEVGQIYEGTVVKTMEFGAFVNFFGSKDGLVHISQLSKQRVQKTTDVVKEGDKVKVKLLGFDDRGKVRLSMRVVDQATGEDLEAKEAAERKAAAADEPAAGE*