ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5947_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 346..615

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000375B3E6 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 118
  • Evalue 4.90e-24
Transcriptional regulator {ECO:0000313|EMBL:EJC80462.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 90.0
  • Bit_score: 117
  • Evalue 9.00e-24
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 90.0
  • Bit_score: 115
  • Evalue 7.70e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGAACACCGATCCAAGCTGGGATCTCTATCGCAGTTTTCTCGCCGTCCTGGACGAAGGCTCACTGTCGGGCGCCGCCCGCCTCTTGGGCCTGACCCAGCCGACGATAGCCCGGCACATCGATGCCCTTGAGGCCGCCACCGGCTGCGGCCTGTTTCTGCGCTCGCAGCGCGGATTGATCGCCACCGACGCGGCGCTGGAACTCAAACCCTATGCGCAAACCCTCGCCGCGANNNNNNNNNNNNCGCGTCAGGCTACGGCGAGACGGTGA
PROTEIN sequence
Length: 90
MNTDPSWDLYRSFLAVLDEGSLSGAARLLGLTQPTIARHIDALEAATGCGLFLRSQRGLIATDAALELKPYAQTLAAXXXXXRQATARR*