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SCNpilot_expt_1000_bf_scaffold_5947_14

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(9054..9626)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Methylocystis rosea RepID=UPI000366E9B2 similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 172.0
  • Bit_score: 197
  • Evalue 1.40e-47
rimM; ribosome maturation factor RimM similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 176.0
  • Bit_score: 196
  • Evalue 9.50e-48
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 176.0
  • Bit_score: 196
  • Evalue 4.20e-47

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Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCTGCTCCAAGCGGGCGCGACGGCAAATTCGTCGCGCCGGCTTCCGGCCTCGTACTCGTCGGCCGCTTCGGCGCGCCGCACGGGGTGCGGGGCGAGATTCGCATCAAATCCTACACGGGCGATCCCCTGGCGCTTGGCTCTTACGGCGGGCTGACCGATGTCACGGGGACGCGCCGCTTCGCGCTCAAGCGCGTGCGCCCGGTGAAGGACGATATGCTGGTGGCGCAGGTCGAGGGCGTTGCCGATCGCAACGCCGCCGAGGCGCTGACCAATGCTGATATCTTCGTGCCGCGCGCCAATCTGCCGGCGCCCGACGACGATGAATTCTATTTCTCCGACCTGATCGGGCTGGCTGTCGTGCTGCCCGACGGCAGCCGCTTCGGCACGGTGCGCGCGGTCGATAATTTCGGCGCCGGCGACATTCTGGTGATCGAAACCGGCGCGGGCGAAGAAGCGCTGCTGCCGTTCACCAAACTGGTGGTGCCGAAGGTCGATATCGCCGGGGGCGCCGTGCATGTGGTGCTGCCGGAGGAGATCGACGGCGAAGACGAGGCGCAGTCAACCGAATAA
PROTEIN sequence
Length: 191
MAAPSGRDGKFVAPASGLVLVGRFGAPHGVRGEIRIKSYTGDPLALGSYGGLTDVTGTRRFALKRVRPVKDDMLVAQVEGVADRNAAEALTNADIFVPRANLPAPDDDEFYFSDLIGLAVVLPDGSRFGTVRAVDNFGAGDILVIETGAGEEALLPFTKLVVPKVDIAGGAVHVVLPEEIDGEDEAQSTE*