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SCNpilot_expt_1000_bf_scaffold_5947_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(10509..11006)

Top 3 Functional Annotations

Value Algorithm Source
Ffh, signal recognition particle protein n=1 Tax=Methyloferula stellata RepID=UPI000364BA76 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 165.0
  • Bit_score: 261
  • Evalue 6.60e-67
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 154.0
  • Bit_score: 254
  • Evalue 1.90e-65
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 154.0
  • Bit_score: 254
  • Evalue 8.70e-65

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GAGATCAAGCGCGCCGCCAGCCCGCATGAAATTCTTTTGGTCGCCGACTCGCTGACCGGCCAGGACGCCGTCAATCTGGCGCGCAATTTCAACGATCGCGTCGGCATCACCGGCATCGTGCTGACCCGCACCGATGGCGATGGCCGTGGCGGTGCCGCGCTTTCCATGCGCGCCGTCACCGGCAAGCCGATCAAGCTCATCGGTACGGGTGAAAAGGTCGAGGACCTCGACGATTTCAATCCGCAGCGCATCGCCAACCGCATTCTCGGCATGGGCGACATCGTCGCTTTGGTCGAAAAGGCGGCGGCGTCGATCGATGCCGAGAAAGCCCAGGCCATCGCCGAGAAGATGCGCAAGGGCAAGTTCGACCTCGACGACATGGCCGAACAATTGGCGCAGGTGGAAAAGATCGGCGGCCTTGGCGGCATCATGGGCATGCTGCCCGGCATCGCCAAGATGAAGGGGACCAGATCGCCTCGCGTATTGACGACAAGATGA
PROTEIN sequence
Length: 166
EIKRAASPHEILLVADSLTGQDAVNLARNFNDRVGITGIVLTRTDGDGRGGAALSMRAVTGKPIKLIGTGEKVEDLDDFNPQRIANRILGMGDIVALVEKAAASIDAEKAQAIAEKMRKGKFDLDDMAEQLAQVEKIGGLGGIMGMLPGIAKMKGTRSPRVLTTR*