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SCNpilot_expt_1000_bf_scaffold_6714_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 6346..6894

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator PecS n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYG8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 163.0
  • Bit_score: 149
  • Evalue 4.00e-33
HTH-type transcriptional regulator PecS {ECO:0000313|EMBL:EYR83649.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 163.0
  • Bit_score: 149
  • Evalue 5.70e-33
MarR transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 167.0
  • Bit_score: 146
  • Evalue 1.10e-32

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGACAAACCAACTCACTGATTCCGTCGAACATCTGTTGCAGGAATGGCGGCGCGAGCGGCCCGAGCTCGATCCCGCGCCGATTGGCGTGCAGGGGCGCGTCGTGCGCCTGTCGGCACATCTGCTGCGCGCGGCGGAGGATTATCTCAATCCGCTCGATCTCGGCTGGGAGGCGTTCAGCCTCATCGTCACGTTGCGCCGTTCCGGCAAGCCCTATGAAATGCGGCCGACCGACATTCTGCGCGAATCCCTGCTCACCTCGGGCGCCGTCACCAATCGCATCGATCGTGTCGAGCGCTTGGGGCTGGTCGAGCGCCGGCCTGATACGGAGGATCGCCGCAGCTATGTCATCAAGCTGACGCCGGCGGGCAAGAAGCTGGCGGACAAGGCGATCGCCACGCATATCGATGCGGTCGAAGGTCTGCTCGATGTGCTCTCGGCCAAGGAACAGGCGCAGCTTGCCGGCCTGTTGTCGAAATTGCTTGGCGCTTTCGAAGACAAGGCAAAGCCGAAGGCGCGTGGGCGCAGCCGCGCGGTGGCGGGCGACTAG
PROTEIN sequence
Length: 183
MTNQLTDSVEHLLQEWRRERPELDPAPIGVQGRVVRLSAHLLRAAEDYLNPLDLGWEAFSLIVTLRRSGKPYEMRPTDILRESLLTSGAVTNRIDRVERLGLVERRPDTEDRRSYVIKLTPAGKKLADKAIATHIDAVEGLLDVLSAKEQAQLAGLLSKLLGAFEDKAKPKARGRSRAVAGD*