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SCNpilot_expt_1000_bf_scaffold_9437_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 8824..9120

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000368032A similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 96.0
  • Bit_score: 86
  • Evalue 2.30e-14
Membrane protein {ECO:0000313|EMBL:KEA09014.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 107.0
  • Bit_score: 80
  • Evalue 1.30e-12
ropB2; outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 107.0
  • Bit_score: 79
  • Evalue 6.70e-13

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGAAAAAGTATTCGGTTGCGACGGCTGCGGTCGCGCTTGTGATGATAAGCGGAGCTGCGCTGGCGGCCGACCTGCCCCGCCGCGTTGAACCCGCCCCACCGCCGGCCCCCATCTTCACCCAACCCGCGTTCACCTGGACAGGTTTCTACGTCGGTCTTTCCGGCGGCGGCGCTTTCGGCCGTCTCGGCCGCGGCTCGAATGATTTCGGCTCCGCCAGCGGCGGTATGGTCGGCGGCACGCTCGGCTATAACTATCAGGTCAACAACATGTTCGTCGTCGGTCTTGAGGCGACATGA
PROTEIN sequence
Length: 99
MKKYSVATAAVALVMISGAALAADLPRRVEPAPPPAPIFTQPAFTWTGFYVGLSGGGAFGRLGRGSNDFGSASGGMVGGTLGYNYQVNNMFVVGLEAT*