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SCNpilot_expt_1000_bf_scaffold_9375_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 4944..5588

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D06877 related cluster n=1 Tax=unknown RepID=UPI0003D06877 similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 190.0
  • Bit_score: 222
  • Evalue 3.40e-55
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM34259.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 192.0
  • Bit_score: 226
  • Evalue 3.30e-56
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 190.0
  • Bit_score: 209
  • Evalue 9.30e-52

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGAAACAGTGATCGCAGCCACGCGAAAACCCCGGGAGCGGATTATCGAGGCGGCCTGCGACCTATTCCGAAAGCATGGCATTCGCGGTGTCGGCGTCGACGCCATCGCCGAGGCAGCGGACACCAATAAAATGACGCTTTATCGTCATTTCGGCTCGAAGGACGATCTCGTCGTCGCCTGGCTGCGCGAGGTCGAACAGGCCGGCGAAACAGCGTGGAATGACCTTCTCGCCGCTCATCCCAACGATCCGATGGCGCGCATCCAGGATTGGGTCGGCAAGGCGGCCGAATGCGCCGTCGGCGACGGTCGCGGCTGCGACATGGCCAATACGGCCATCGAGCTGACCGAGGAGGGCCATCCGGCCCGGCGCCTCATCCAGGAATTCAAGATTCGCCATCGCGAGCGGCTGGTGCAGCTCTGTCGTGATGCCGGGATTGTCGAAGCCGATCTCCTGGCCGATGCGCTTTATCTTTTGGTCGAGGGCGCGCGCGTCTCCCGCCAAAGCGTTGGCGTGCAAGGGCCTTGCGCGCATTTTACCACCGTCGCCCAGGCGGTGATCAGGGCTTTCGCTCAAAACAAAAAGATGGGCGCCGCCGCGCCATCGCTCAAGAAGGCGCCGGAAAAACAGCCTGTGCGCGCCTGA
PROTEIN sequence
Length: 215
METVIAATRKPRERIIEAACDLFRKHGIRGVGVDAIAEAADTNKMTLYRHFGSKDDLVVAWLREVEQAGETAWNDLLAAHPNDPMARIQDWVGKAAECAVGDGRGCDMANTAIELTEEGHPARRLIQEFKIRHRERLVQLCRDAGIVEADLLADALYLLVEGARVSRQSVGVQGPCAHFTTVAQAVIRAFAQNKKMGAAAPSLKKAPEKQPVRA*