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SCNpilot_expt_1000_bf_scaffold_9096_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(7285..7761)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V128_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 29.8
  • Coverage: 178.0
  • Bit_score: 79
  • Evalue 2.60e-12
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 178.0
  • Bit_score: 79
  • Evalue 8.20e-13
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU39051.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.8
  • Coverage: 178.0
  • Bit_score: 79
  • Evalue 3.70e-12

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGATCGATGCCGCCGTCGTCGTTTATAGCGCCGACGAAGGACTCTACGAATCCGAACATTTGTTCGATGACGAATTGATCTTCGTCGCCTCCAAGACGCATCCCTTGCGCCGCAAGCGCGCACAGGCTTTTTCGCGCCTGACGGCCTATCCCTTGATCGAGGTCTCGATCGCGACCACCATCATGCGACCCTTTTTCGAGGAACAAGAAGCCATCGGACATAAATGGTCGCCGATGGTCAGCGTGCCGCAATTCCTGATCGTGCCGTCGATGTTGCAGGACAGCGATTGTATCGGCGTGATGGGGCGCCTTGCGGCCCGCAAATTCGAAGACATGGGCGCAGCCGCCATTCTCGAAATCTCGGAGCCGACACCGGTCGTTCATTATCGCCTGATCTGGCACAAGCGTCGCACGCACGACCCCGCGCATCGATGGATGCGCGAGATGATCGGTACCATCGCAGCCAAGAAGCGATGA
PROTEIN sequence
Length: 159
MIDAAVVVYSADEGLYESEHLFDDELIFVASKTHPLRRKRAQAFSRLTAYPLIEVSIATTIMRPFFEEQEAIGHKWSPMVSVPQFLIVPSMLQDSDCIGVMGRLAARKFEDMGAAAILEISEPTPVVHYRLIWHKRRTHDPAHRWMREMIGTIAAKKR*