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SCNpilot_expt_1000_bf_scaffold_9096_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(7763..8149)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V8P8_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 123.0
  • Bit_score: 109
  • Evalue 2.50e-21
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 126.0
  • Bit_score: 109
  • Evalue 7.90e-22
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABQ68664.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 123.0
  • Bit_score: 109
  • Evalue 3.50e-21

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGATGGATATTCTAAAGCGGCTCGATCTCAATCTGCTGATCGCTTTCGACATCCTGCTCGACGAGAGAAGCGTGACGCGCGCCGCCGCGCGCCTGTCGCTCAGCCAGCCAGCGACCAGCGCCGCATTGGCGAGATTGCGAGCCAGCTTCAACGATCAATTGCTCATTCGCAGCCGCGGCGAAATGTTTTTGACCGAGCGCGCCAGTGCGTTGCGCCAACCGATCAAGGATGCGCTGCGCGCAGTGGCGCAGGCGCTTGAAGCGCAGGACAGTTTTAGGCCGGAGGCTTTCGACGGCCGCTTTCGTCTGGCAATGACCGATATCGCCAGCTTCACGCTCGGTTCCGACATCGTCCAGGACCTGCGCCATAAAGCGCCGTCTGCATGA
PROTEIN sequence
Length: 129
MMDILKRLDLNLLIAFDILLDERSVTRAAARLSLSQPATSAALARLRASFNDQLLIRSRGEMFLTERASALRQPIKDALRAVAQALEAQDSFRPEAFDGRFRLAMTDIASFTLGSDIVQDLRHKAPSA*