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SCNpilot_expt_1000_bf_scaffold_9096_24

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 21251..21955

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8E2 similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 221.0
  • Bit_score: 215
  • Evalue 4.50e-53
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 212.0
  • Bit_score: 205
  • Evalue 1.50e-50
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 226.0
  • Bit_score: 221
  • Evalue 1.20e-54

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Taxonomy

RLO_Sphingomonadales_63_15 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
TTGAGCGGACCGACCGGAAACGAGACCAATCTGACCAAGGGGGCCTATGCTACCTTGCGGGCCGATCTTTTGGCCTGTCGTCTGCGGCCCAATGAAAAGCTCAACATCGCGGCGCTTTCGGCGCAGCTCGGCGTCAGCCTCGGAGCCGTGCGCGAGGCTCTGTCCCGGCTCACCTCGGATGGCCTGGTGACGGCGGAGACCAATCGTGGTTTTCGCGTTGCCGGCGTGTCGGAGGCGGATTTGCTCGATCTCACCAGCACGCGGATCGAATTGGAGACCGCGTGTCTGCGCCGTGCCATTCGTGCCGGCGGCGTCGATTGGGAGGCGCAGGTCGTTTCCGCCCATCATCGGCTTTCACGCACGCCTGAGCGGACGGCGGATGATCTCGAACGGGTCAGCGAGGATTGGGCGGCCGCGCATAAGGATTTCCACGCCGCGTTGATCGCCGCTTGCGAAAGCCCATGGCGGATGCGCTTGCGCGACTTCCTCTTCGATCAGACCGAACGCTATCGTCGCCTGTCGGTTCTCGCGCCGCGCCAGGAGCGCGATCTTCCAGCGGAGCACCGTGCTTTGATGGAAGCCACGCTCGATCGCGCCGAGGAAACCGCCGTGGCGCTGCTCACGGCGCATTTGGACGCGACCGCCAGCCGTGTGCGTGCGCTGGTCGAGGAAGACAGCAAGGGCAAACTGCCTTTGGCCGGCTGA
PROTEIN sequence
Length: 235
LSGPTGNETNLTKGAYATLRADLLACRLRPNEKLNIAALSAQLGVSLGAVREALSRLTSDGLVTAETNRGFRVAGVSEADLLDLTSTRIELETACLRRAIRAGGVDWEAQVVSAHHRLSRTPERTADDLERVSEDWAAAHKDFHAALIAACESPWRMRLRDFLFDQTERYRRLSVLAPRQERDLPAEHRALMEATLDRAEETAVALLTAHLDATASRVRALVEEDSKGKLPLAG*