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SCNpilot_expt_1000_bf_scaffold_12268_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: 3410..4348

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein n=1 Tax=Methylocystis parvus RepID=UPI0003101F57 similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 312.0
  • Bit_score: 362
  • Evalue 4.00e-97
  • rbh
type II secretion system protein; K12510 tight adherence protein B similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 312.0
  • Bit_score: 329
  • Evalue 1.50e-87
Type II secretion system protein {ECO:0000313|EMBL:ACK83546.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 312.0
  • Bit_score: 329
  • Evalue 6.80e-87

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Taxonomy

Methylobacterium extorquens → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGGCGGCCGGCTGCGTATTCTACGCGCTGGTCTATCCTTATCTATCCGGGAGTATCAAAGCCGAGCGGCGCCAGCGCAGCTTGACGGCCAAGGGCCGAGGTCCGGCGAGCAACGAGCGCAACACGGATATCGCGGCGCGGCGCCAAAAAATCGCCGAAAGCCTCAAGGAACTGGAAGAAAAGTCCACCCGCAAGAAAGCGGCGTTGGAAGATCGTATCGCTCAGGCCGGTTTGGATTGGTCAAAAAGCAAGTTCTATACGGTCTCGGCCATCATCGGTGTGATCTGCGGCGCCGGCTTTTTCGTTCTGACAGCCAATCCTTTCTATGCCCTGGCCTGCCTGATCATCGGCGGCCTCGGCTTGCCGAACTGGTTTATCAATTACAAGCGCAAACGGCGTATCAACAAGTTCATCGATGAATTCCCCAATGCCATCGATGTTATCATTCGAGGCGTGAAGGCTGGCTTGCCGCTCGCCGATTGTCTGCGCGTCATCGCCTCCGAAGCCGCAGAGCCGGTCCGCAGCGAATTCCGCTATATTGTCGAAACGCAAAGTGTCGGCATGCCCCTCGGCGAAGCGATCGAGAAGCTTGCCGTACGCGTGCCGGTGCCTGAAGCCAACTTCTTCGCTCTCGTCATCGGCATTCAACAGAAGTCCGGCGGCAATCTTTCTGAAGCGCTCGGCAATCTGTCGCGCGTCTTGCGCGACCGCAAGAAAATGAAAGCGAAGATCAAGGCCGTCTCCGCCGAAGCCAAGGCGTCCGCCAGCATCATCGCTTCGTTGCCTTTTGCCGTCGGCGGCCTCGTTTATGCTACCGCGCCCGGCTATATCTCCCTGCTGTGGACCAATCCCAGCGGACGCATCGTCATGGGTGTCTGTGCGCTTTGGATGCTCATCGGCGTCTTGTCGATGCGTAAAATGATCAACTTCGATATGTAG
PROTEIN sequence
Length: 313
VAAGCVFYALVYPYLSGSIKAERRQRSLTAKGRGPASNERNTDIAARRQKIAESLKELEEKSTRKKAALEDRIAQAGLDWSKSKFYTVSAIIGVICGAGFFVLTANPFYALACLIIGGLGLPNWFINYKRKRRINKFIDEFPNAIDVIIRGVKAGLPLADCLRVIASEAAEPVRSEFRYIVETQSVGMPLGEAIEKLAVRVPVPEANFFALVIGIQQKSGGNLSEALGNLSRVLRDRKKMKAKIKAVSAEAKASASIIASLPFAVGGLVYATAPGYISLLWTNPSGRIVMGVCALWMLIGVLSMRKMINFDM*