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SCNpilot_expt_1000_bf_scaffold_12711_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(3..722)

Top 3 Functional Annotations

Value Algorithm Source
Mandelate racemase/muconate lactonizing protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRM7_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 239.0
  • Bit_score: 438
  • Evalue 5.70e-120
Variovorax paradoxus strain MEDvA23 contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33934.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 240.0
  • Bit_score: 439
  • Evalue 2.80e-120
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 239.0
  • Bit_score: 438
  • Evalue 1.80e-120

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCGCGAAGTCGCGGGGCCGGCCTTGATCGGCGAGGACCCGCTGGCCACCGAGCGGCTGTGGAACAAACTTTATTGGCTGCTGTCGCCGCGCGGCCAGACGGGCTATGCCAGCCACGCGATTGCAGCACTTGATATTGCGCTGTGGGACCTCAATGCCAAATCGCTTGGTTTGCCGCTGTGGCGCCTGCTGGGCGGCGCTCGCGCGCGCGTGCCGGTTTACGCGACGTTCGGTTTCGGTTTCTTCGAGCGTGATCAGCTCGCCGAGGCGGCGAAGCTGTTTGTATCGCGGGGTTTTCGACGGTTGAAGATGACGGTCGGCGACCATGCGCTGGCGCGGCGCGACGAACCGCGACCGATCGACAAGGTCATCGCTGAGGATGTGCGCCGTGTTGCCGCTGTGCGCGAAGCCGTGGGCCCGGACGTCAATCTCTATGTCGACGCCAATTGCGGCCTCGACCTGTTCCATGCGACCGAACTCGCGCAGCGTATCGAACCCTATGGAATCACGTTCTTCGAGGAGCCGCTGACGCAAAACGACGTGCGCCAAATGGCCGAGCTGCGTCGGCGCACGCGCATTCCATTGGCCTGCGGCCAGAACGAAGGTTTGGCTTTCCGTTTCCGCGATCTGCTCGTGCATCAAGCCGCCGACGTCTTGCAACCCTATGTCGCGATCACCGGCGGTTACTCACAATGTCTGAAGATCGCCGGCATGGCCCAG
PROTEIN sequence
Length: 240
VREVAGPALIGEDPLATERLWNKLYWLLSPRGQTGYASHAIAALDIALWDLNAKSLGLPLWRLLGGARARVPVYATFGFGFFERDQLAEAAKLFVSRGFRRLKMTVGDHALARRDEPRPIDKVIAEDVRRVAAVREAVGPDVNLYVDANCGLDLFHATELAQRIEPYGITFFEEPLTQNDVRQMAELRRRTRIPLACGQNEGLAFRFRDLLVHQAADVLQPYVAITGGYSQCLKIAGMAQ