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SCNpilot_expt_1000_bf_scaffold_16069_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(5724..6239)

Top 3 Functional Annotations

Value Algorithm Source
Putative Transcriptional regulatory protein, MarR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGB6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 164.0
  • Bit_score: 218
  • Evalue 3.90e-54
Putative Transcriptional regulatory protein, MarR family {ECO:0000313|EMBL:CCE05504.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 164.0
  • Bit_score: 218
  • Evalue 5.50e-54
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 164.0
  • Bit_score: 210
  • Evalue 4.40e-52

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
TTGGCGAGCAACGTGGAAAGCGATGATCTGTCTCTGGCCTCAAAGCCGGAAGAGGCAAGCGAATATCGCGCCGAGATCCGGCTCTGGCTGCGGCTGCTCGCCTGCACCACCCTGATCAGCGGCAAACTGCGTCGCAATTTCCGCGAGCAATTCGATTTCACCCTGCCGCGTTTCGAACTGCTGGCGCAGCTCGACTTCGAGCCGGGCGGCCTCGTGCTGGGCGAATTGTCCAAGCGGCTGATGGTCTCGGCCGGCAATATCACGCCCATTCTCACGCGCCTGATCGAGGAAGGCTACATCACGCGCGCCCCGTCGAATCTCGATCGGCGGGTGCAGATCGTTTGCCTCACGGTGGAAGGCCGCAAGAAATTTCGCCGCATGGCGAAAAAGCACGGCCAATGGCTGAACGACATGTTCCAGGACGTCGATATCGAGGATATCGAGGCGATGGTTCAGCAGCTCTCACGGCTGAAGAAAGTGCTGAAAGACAGCGAGCCGGACGGCGCGGGAAAATAG
PROTEIN sequence
Length: 172
LASNVESDDLSLASKPEEASEYRAEIRLWLRLLACTTLISGKLRRNFREQFDFTLPRFELLAQLDFEPGGLVLGELSKRLMVSAGNITPILTRLIEEGYITRAPSNLDRRVQIVCLTVEGRKKFRRMAKKHGQWLNDMFQDVDIEDIEAMVQQLSRLKKVLKDSEPDGAGK*