ggKbase home page

SCNpilot_expt_1000_bf_scaffold_20737_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(1598..1951)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVF7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 104.0
  • Bit_score: 130
  • Evalue 1.30e-27
LysR substrate binding domain protein {ECO:0000313|EMBL:EHM03030.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 104.0
  • Bit_score: 130
  • Evalue 1.80e-27
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 108.0
  • Bit_score: 123
  • Evalue 6.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acetobacteraceae bacterium AT-5844 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GTGGTGCCCTTGGTGCTCTATCCGCCGCCCAGCATTACGCGCATCCATGCGATCGACACGCTGGAACGCGCCGGTCGCGCCTGGCGGATCGCCTGCACCAGCGACAGCCTGGCGGGCTTGCGGGCGGCGACGGTCGCCGGCCTCGGCGTCACCGCCCATTCAGCACGCCTGCTGCCGCCCGGTCTCGTCGAAGTCGAACCGCAAGACGCGTTGCCAACCCTGGGTTCAATCGAATTCGTGGTGGTGGGTGGTCAATCCCATCAGGAAGCGGCACGCGCGCTGGCGACAAGCATTTTGTCGGACACGAGCCGCCTGCTGGTGGCCGCAACACGGCGATCAGCCGCTACACCTTAA
PROTEIN sequence
Length: 118
VVPLVLYPPPSITRIHAIDTLERAGRAWRIACTSDSLAGLRAATVAGLGVTAHSARLLPPGLVEVEPQDALPTLGSIEFVVVGGQSHQEAARALATSILSDTSRLLVAATRRSAATP*