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SCNpilot_expt_1000_bf_scaffold_24426_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_61_16

partial RP 31 / 55 MC: 2 BSCG 31 / 51 MC: 5 ASCG 8 / 38 MC: 2
Location: comp(2101..2937)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035DE8CD similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 289.0
  • Bit_score: 325
  • Evalue 6.30e-86
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR76061.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 284.0
  • Bit_score: 330
  • Evalue 2.10e-87
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 283.0
  • Bit_score: 317
  • Evalue 5.40e-84
  • rbh

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
GTGAGCCGCTATCTCTATCTGAACGGCATCAAGGCCTTCGAGGCGGCGGCGCGTCTGGGCAGTTTTGCTGCTGCGGCAGCGGAATTGCACGTCACGTCCTCGGCGGTCAGCCGGATGGTGCGATTGCTGGAGGAGCGGCTCAGCACCGCTTTATTTAAGCGTGAGGCGAACCGGCTGGCGCTGACGCCGGCCGGTCAGGCCTATCTCGCCGGGCTGACGCCGCTCTTCGAATCGCTCGTTCGGCTGAGCGAGCATGTGGCGAGCTTCGGCCAGCGCCGGGTGCTGACGGTCGGCGTCGGGCCGACCTTCGCGATCCGCTGGCTCATCCCCCGCCTGGCGGATTTTCGCACGGTGGCGCCCGATGTGGAGGTGCGGTTCGCGACGGGTGGCATCGCCGGCCCGTTTGCCGAGGATTGGACCTGCGGCATCAAGCTGGCGCCCGACGGCGAGGCGGGNNNNNNNNNNNNCCTGGCGCGGCAGATCACCGATGTGGCGGATTGGCGCGAAGCGACCTTGCTGCGGGTGGCGCACGCGCCGCAGGACTGGCCGACGTGGCTCACGGCCGCCGGCCGCGCGGATCTCACAGCCCGCGGGCCGGTGTTCGAAGTCTACGGGCAAGCCTTGCAGGCGGCTGCCGATGGCGTCGGCGTGGCGCTCGGTCTGCGGCCCTATATCGACGACGACATTCACGCCGGACGGCTGGTGGCGCCGCTGGCGCTGACCGTCTCCAAAGGCATGAGCTGGTATCTGATGTTTCGCGAGCACCGCCGCGACGAGCCGGCCTTCAAACTGTTTCGTGACTGGCTGCACGCCAAGACGGCGAAGGTGATCGACTAG
PROTEIN sequence
Length: 279
VSRYLYLNGIKAFEAAARLGSFAAAAAELHVTSSAVSRMVRLLEERLSTALFKREANRLALTPAGQAYLAGLTPLFESLVRLSEHVASFGQRRVLTVGVGPTFAIRWLIPRLADFRTVAPDVEVRFATGGIAGPFAEDWTCGIKLAPDGEAXXXXXLARQITDVADWREATLLRVAHAPQDWPTWLTAAGRADLTARGPVFEVYGQALQAAADGVGVALGLRPYIDDDIHAGRLVAPLALTVSKGMSWYLMFREHRRDEPAFKLFRDWLHAKTAKVID*