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SCNpilot_expt_1000_bf_scaffold_3953_13

Organism: SCNPILOT_EXPT_750_P_Chlamydiae_37_5_partial

partial RP 37 / 55 MC: 1 BSCG 35 / 51 MC: 6 ASCG 7 / 38 MC: 1
Location: comp(12992..13885)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:KIC74923.1}; EC=5.4.99.24 {ECO:0000313|EMBL:KIC74923.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 288.0
  • Bit_score: 354
  • Evalue 1.40e-94
rluC; ribosomal large subunit pseudouridine synthase C; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 290.0
  • Bit_score: 267
  • Evalue 6.80e-69
Pseudouridine synthase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KZ84_PARAV similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 290.0
  • Bit_score: 267
  • Evalue 2.20e-68

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Taxonomy

Neochlamydia sp. TUME1 → Neochlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 894
ATGCAATGGATTGTATCAGGATCTGAAGCGGGTCAAAAGTTAGTCGTTTTCCTGAGAAATAAACTGGGTCCAGGGTTCTCCTCCCGCCAAATTAAGCAGGGGATTGAGAATAACTTGTGCCAAGTCAATTCCAGATTAGAACATTTTGCTTCGATGGTGCTGGCTAAGGGAGATGTGGTTCTCTACGTAATAGAATCTCTAAAAAGTCCAGTAAAATTTCGCTTTCAATTTTCCTCTAAAGACATCGTTTATGAAGACGCCTCCCTGCTTATTTATAACAAGCCGGCAGGTTTTGTCTCTGATGGACCTGAGATTACACAGGCAATGGAATCGTATAGTCAAGGTGGGTGGGAACTCCTCCATCGCTTGGATCGCGAGACCACGGGCTTGTTAATGTTTACGCGAGGAACCGCCTTTCGCGAAAAGATGGTCTATGCTTTTAAGATGCACGCTGTTAAGAAAACTTACTTCGCGCTGGTCGATGGAATCCCTCCGCAAATGTCTGGAACAATCGAGAATTACTTGGGAAAAGTTCATACCTACAAAGGTCAGGCATTGTGGGGAGCTGTCCCTTCAAAGATCGGACATCATGCCATTACGGATTGGGTCATAGAGCAAAAAGGTTCGCAGGTGTGCCTCCTACGATGCTACCCTCAAACGGGCCGTACGCATCAAATAAGGGTGCATTTAAGTGAGATGGGGTATCCTATTTTAGGAGATAAGCAGTACGGAAAAAAATTTAAATGTTCCTATTTGGCGCCCCGCTGTTTATTGCATGCCTATGCACTTGATTTTATACATCCTCTTACAGGAGAAAAAATTTTTGCAAAGGCTGAATTACCTAAAGATTTTACAGAAGCATTAGAACTATTAGTCGGAAGGGTGGCATCTTGA
PROTEIN sequence
Length: 298
MQWIVSGSEAGQKLVVFLRNKLGPGFSSRQIKQGIENNLCQVNSRLEHFASMVLAKGDVVLYVIESLKSPVKFRFQFSSKDIVYEDASLLIYNKPAGFVSDGPEITQAMESYSQGGWELLHRLDRETTGLLMFTRGTAFREKMVYAFKMHAVKKTYFALVDGIPPQMSGTIENYLGKVHTYKGQALWGAVPSKIGHHAITDWVIEQKGSQVCLLRCYPQTGRTHQIRVHLSEMGYPILGDKQYGKKFKCSYLAPRCLLHAYALDFIHPLTGEKIFAKAELPKDFTEALELLVGRVAS*