ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3881_2

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: comp(321..1418)

Top 3 Functional Annotations

Value Algorithm Source
Permease YjgP/YjgQ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2G4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 365.0
  • Bit_score: 703
  • Evalue 1.50e-199
  • rbh
Permease YjgP/YjgQ {ECO:0000313|EMBL:ENY81692.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 365.0
  • Bit_score: 703
  • Evalue 2.00e-199
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 366.0
  • Bit_score: 611
  • Evalue 1.40e-172
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGAACCAGCTCCATTTCTTTCCGTCGCGAACCATGGCGCTCTATGTCGGGCGGCTGTTCCTGGTGCGCAGTTTCGCGATCCTGTTCGCGCTCGTGCTGGTGCTCCAGACGCTCGACCTGCTGGGCGAGAGCGGCAAGATCCTGTCGGTCGCGGGCAACAGCGACAGCGACGTGTGGCGCTATGTCGGGCTGCGCCTTCCGCAGATCATCGAAACCTTTCTGCCCTTCTCCGTCCTGCTCGGGACGATCTTGACGCTGATCACGCTCAACCAGAACAGCGAGGTCATCGCGATGAAGGCGTCGGGCATGTCGGCGCATCAGGTGCTGGCGCCGCTGTTCCTCGCCGCGCTGTTCGTCGCCGCGATCAGCTTCGGCTTCAACGAAAGGATCGTGACGCGCGCGACTGCGGCGCTCGCCGCCTGGCAGAAGGTCGAATATGCGCAAATTCCGAAAGACACCGGGATTCGATCGAACATTTGGGTTCGCGACGGCAATAATCTGATCAATGCCGCGACCGTCAGCGGCACCGGGACGGCGATCACGCTGCACGGCGTGCGCATCTACGAACGGTCGGGCGGCGTATTGTCCTCGATATTGTCGGGCGACAGCGCGCGGCCGGTCGCGGGTGGGTGGGAACTCACCAACGCCAAGCGCTTCCTGCGCCGCGCCGGTATCGTCCAGCCGCTCGGCACCATCGTCGCCGCGCCGGGCGTGCGTCCCGACCAGTTCACGCTCGCGCAGGTCGATGGCGATCAACTGCCCTTCACCGAACTCAAGGCGGCAATCGGCGATCTCGAGGCAGCGGGGCGACCCGTCGATGCGCTGAAAGGCGTGTTGTGGCACAAGATCTCGGGGCCGCTCTCGGCGGTCCTGATGCCGCTGCTCGGCGCCGTCGCGGCATTCGGCCTGGCGCGATCGGGCAAGCTGTTCGTTCGCGCCATCATCGGCATGGCGCTGGGCTTCGCCTATTTCGTCGCCGACAATTTCGCGCTCGCGATGGGCGACCTCGGCGCCTATTCCCCCTTCCTCGCCGCATGGGGGCCCTTCATCCTGTTCGCGCTGATCGGCGAAATGATCCTGATCCGGACCGAGGAATAG
PROTEIN sequence
Length: 366
MNQLHFFPSRTMALYVGRLFLVRSFAILFALVLVLQTLDLLGESGKILSVAGNSDSDVWRYVGLRLPQIIETFLPFSVLLGTILTLITLNQNSEVIAMKASGMSAHQVLAPLFLAALFVAAISFGFNERIVTRATAALAAWQKVEYAQIPKDTGIRSNIWVRDGNNLINAATVSGTGTAITLHGVRIYERSGGVLSSILSGDSARPVAGGWELTNAKRFLRRAGIVQPLGTIVAAPGVRPDQFTLAQVDGDQLPFTELKAAIGDLEAAGRPVDALKGVLWHKISGPLSAVLMPLLGAVAAFGLARSGKLFVRAIIGMALGFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMILIRTEE*