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SCNpilot_expt_1000_bf_scaffold_19259_6

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: comp(6850..7854)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYN3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 334.0
  • Bit_score: 644
  • Evalue 4.30e-182
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ENY80362.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 334.0
  • Bit_score: 644
  • Evalue 6.00e-182
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 335.0
  • Bit_score: 509
  • Evalue 8.90e-142
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGGCTAATGGCACCGGTCCCCTTGGCGGCGGCAATGCGCGCCCGACGATGGCCGACATCGCGCGCGAGCTGGGCGTCGCGAAGATCACCGTTTCGCGCGCGCTTTCGGACAGCCCGACGGTCAAGGAAAGCACGCGCCGGCTGATCCGCGATACCGCCGAACGCATGGGCTACCGGCTCAATATTTCGGCGCGCAATCTGCGGCAGCAGCGCACCCGGACCATCGCCGTCGTCATCGAAATGGCCCCCTCGCACGACCGCCTGATGAGCGAACCTTATCCGCTCTCGCTGCTCGGCGGGATCATGCAGGAACTGACCGCGGCCGGACAGAATATGGTGCTGACGACGATCGAGCTGTTCGCACAGCATCCGCCGTCGGCCGACGGGGTCATCCTGCTGGGGCAGGGTGTGCATGACGATGCCGCCGCGGCGATCGAGGCGACCGGGCTGCCGTATGTGGTCTGGGGCGCGGCGCACGGCCCGCCGGGACGCGTCGTCGTCGGCAGCGACAATCGCGCGGGCGGCCGGCTCGCCGCCGACTATCTGCGCGCGCGCGGGCGCCGCGCGCTGCTGTTCCTTGGTGAAACCCAGCATGGCGAGGTCGAGGATCGGCTCCAGGGCTTTGCCGACGCGCTGAAGGGCAGCGACGCCGCGGTGATCGACCGGATCGCCTGCGCCTTTACCGCCGCCGCCGGGCGCGAGGCGGTCGATCGGCTTCTGGCCGAGGGCACTGCCTTCGACGGCGTCTTCGCGGCGAGCGATGCCATTGCGATGGGCGCGATCGAAGCGTTGCAGGCGCGCGGCCTGTCCGTACCCGGCGACGTATCGGTCGTCGGCTTCGATGATTCCCCCGGCGCGGCGATCGTATCGCCGAAACTCACCACCATCCGGCAGGACTGGGCGGTCGGCGGCGAATTGCTCGCCAAGAAGGTGCTCGATCTCGTAGCGGGCAAGGGCGCCGATTCGCGCGCCATGAGCGTGGAACTGGTCGCACGCGAAAGCTGA
PROTEIN sequence
Length: 335
MANGTGPLGGGNARPTMADIARELGVAKITVSRALSDSPTVKESTRRLIRDTAERMGYRLNISARNLRQQRTRTIAVVIEMAPSHDRLMSEPYPLSLLGGIMQELTAAGQNMVLTTIELFAQHPPSADGVILLGQGVHDDAAAAIEATGLPYVVWGAAHGPPGRVVVGSDNRAGGRLAADYLRARGRRALLFLGETQHGEVEDRLQGFADALKGSDAAVIDRIACAFTAAAGREAVDRLLAEGTAFDGVFAASDAIAMGAIEALQARGLSVPGDVSVVGFDDSPGAAIVSPKLTTIRQDWAVGGELLAKKVLDLVAGKGADSRAMSVELVARES*