ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_750_bf_scaffold_1452_7

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 6085..6420

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI00035D68E2 similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 110.0
  • Bit_score: 197
  • Evalue 6.10e-48
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 111.0
  • Bit_score: 196
  • Evalue 3.30e-48
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 111.0
  • Bit_score: 196
  • Evalue 1.50e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAGTGGAACTGGCAAAACCGTAACACGTGTCGATTTGTGTGAAGCCGTCTACCAAAAGGTGGGCCTGTCGCGCACGGAGTCGGCAGCGTTCGTTGAACTGGTCCTGAAGGAGATCACCGATTGCCTTGAAAAAGGGGAGACGGTGAAGCTGTCGTCGTTCGGCTCTTTCATGGTGCGCAAGAAAGGCGAGCGGATCGGCCGCAATCCGAAGACCGGCACCGAGGTGCCGATTTCGCCTCGTCGCGTCATGGTGTTCAAGCCGTCGGCCATCCTCAAGCAACGCATCAACGGCAACAGTGCCGCAGCCGGCAACGGTGCCGACAAGAGTAGCTAA
PROTEIN sequence
Length: 112
MSGTGKTVTRVDLCEAVYQKVGLSRTESAAFVELVLKEITDCLEKGETVKLSSFGSFMVRKKGERIGRNPKTGTEVPISPRRVMVFKPSAILKQRINGNSAAAGNGADKSS*