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SCNpilot_expt_1000_bf_scaffold_867_8

Organism: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 2796..3386

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346CD3A similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 196.0
  • Bit_score: 355
  • Evalue 4.00e-95
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 196.0
  • Bit_score: 357
  • Evalue 1.10e-95
rplE; ribosomal protein L5; K02931 large subunit ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 196.0
  • Bit_score: 347
  • Evalue 2.00e-93

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGCAGCGACTGAGGCTGCGGAGGCTGTCAAGGTGCAGCCCCGCCTGAAGGCCAAGTACAACACCGAGATCAAGAAGGCTCTGCAGGAGCAGTTCGGCTACGCCAACGTCATGCAGATCCCCGGCCTGGTCAAGGTGGTCGTCAACACCGGTGTCGGCGAGGCGGCTCGCGACAGCAAGGTGATCGATGGTGCGGTCGAGGACCTCACCCGGATCACCGGTCAGAAGCCCATCGTCACCAAGGCTCGCAAGTCGATCGCGCAGTTCAAGCTGCGCGAGGGCCAGGCCATCGGCGCGCACGTCACCCTCCGCGGTGACCGCGCGTGGGAGTTCCTGGACCGCCTGGTGAACCTCGCTCTGCCCCGCATCCGCGACTTCCGCGGTCTGTCGGGTGAGCAGTTCGACGGCAACGGCAACTACACCTTCGGTCTCCAGGAGCAGAGCGTGTTCCACGAGATCGATCAGGACAAGATCGACCGCGTCCGCGGTTTCGACATCACCGTGGTCACCACGGCCAAGACGGACGACGAGGGTCGCGCGCTGCTGAAGGCGCTCGGCTTCCCGTTCAAGTCGGCCGACGCCGCGGCGTAA
PROTEIN sequence
Length: 197
MAATEAAEAVKVQPRLKAKYNTEIKKALQEQFGYANVMQIPGLVKVVVNTGVGEAARDSKVIDGAVEDLTRITGQKPIVTKARKSIAQFKLREGQAIGAHVTLRGDRAWEFLDRLVNLALPRIRDFRGLSGEQFDGNGNYTFGLQEQSVFHEIDQDKIDRVRGFDITVVTTAKTDDEGRALLKALGFPFKSADAAA*