ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1301_9

Organism: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(7777..8514)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, DNA invertase Pin n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MGE8_BRAFD similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 229.0
  • Bit_score: 253
  • Evalue 2.00e-64
site-specific recombinase, DNA invertase Pin similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 229.0
  • Bit_score: 253
  • Evalue 6.40e-65
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:ACU86381.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 229.0
  • Bit_score: 253
  • Evalue 2.90e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brachybacterium faecium → Brachybacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCACCTCGTCCGACCTCATGATCACGACCAGCAGGACTCTCGACGAGTTGCTCGCAGCCCGTGCCAGGCTCGTCGGCGTGAAACCGAATCACGATGGGACCGCACGCAAGTGGCTTCTGTCAGGTATCGCGATCTGCTCGGTATGTCGCGAACCAGTGCGGTCGGCGCGCGGAGAGACGCATCCCACAGCGCGGAAAGACGGCACAGGGCCCGCCCCTCGCACGAGGTACCACACCTATCGCTGCGTCAACGGGCACTTCATGCGTAACGGCGACATCATCGACGAGCTCGTCGCCGAGCTGTGCATTCGGCGTATCGCAGAAGCCGATGCGAGCGAGCTTTTCGGAACTGCAGACGACTGGCCGGATATCCCAGCGCTTCACGCTCAGCGGACGGCACTCGAAGGACGGCGGTCTTCGATCTCCTCGCTTCTTGCCAAGGGGCTCTTGACCGAGCGAGACGCCGAGCAAGATCTCACTGACCTCGCAGCAGAGATCCGCGCGGTGAACGATGAACTCGCCCAGGCTGTCCAGTTGAGTCCGCTCGCGGACCTTGCGAGCGTCGGCGACGCGCACGTGTGGTGGGCGCAGGTCACGTTGGCACGCCGGCGGGCAGTCATCGATGCACTCATAACCGTTGCCATCCGGCCTGTCGGAATGGGGAAACGCGTCACGACGCTTGACGCGGCGATCGAGACGGTCGAGATCGACTGGCGCGCCCGGTCGCGGTAG
PROTEIN sequence
Length: 246
MPRTSSDLMITTSRTLDELLAARARLVGVKPNHDGTARKWLLSGIAICSVCREPVRSARGETHPTARKDGTGPAPRTRYHTYRCVNGHFMRNGDIIDELVAELCIRRIAEADASELFGTADDWPDIPALHAQRTALEGRRSSISSLLAKGLLTERDAEQDLTDLAAEIRAVNDELAQAVQLSPLADLASVGDAHVWWAQVTLARRRAVIDALITVAIRPVGMGKRVTTLDAAIETVEIDWRARSR*