ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2011_6

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_41_5

near complete RP 46 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: comp(7875..10616)

Top 3 Functional Annotations

Value Algorithm Source
methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 917.0
  • Bit_score: 1332
  • Evalue 0.0
methionine synthase n=1 Tax=Niabella aurantiaca RepID=UPI0003755D5B similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 914.0
  • Bit_score: 1504
  • Evalue 0.0
  • rbh
Methionine synthase {ECO:0000313|EMBL:AHF15793.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 911.0
  • Bit_score: 1446
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2742
ATGAAACAAATTCAGTCATATCTCACACTCAGCGGGTTGGAACCTTTGATCGTTCGCCCCGAAAGTAATTTTATAAACGTAGGTGAAAGAACCAATGTAACCGGTTCAAAAAAATTCGCACGCCTTATTCGTGAAAACAAATATGAAGAAGCTCTGAGCGTAGCGCGTCAACAGGTGGAAAACGGAGCACAAATCATCGACATCAATATGGATGATGCTTTGCTCGACGGTGTTCAGGCCATGACGACATTTCTCAATCTGGTACAAAGCGAACCCGATATCGCCAAAGTGCCTGTTATGATTGACTCCTCCAAGTTTGAGATCATCGAAGCCGGGCTGAAATGCGTGCAGGGTAAATGCGTTGTGAATTCCATATCGATGAAGGAAGGCGAAGAAAAATTTATAGAGCAGGCGATCATTTGCAAGAGCTACGGCGCGGCTGTCATCGTAATGGCTTTTGATGAAAAAGGCCAGGCCGATACCAAAGAACGGAAGGTAGAGATCAGCCACAGGGCCTATAAAATTTTAACGGAGCAGGTAGGTTTTGCACCACAGGATATTATTTTCGACCCCAATATTTTTGCCATTGCCACCGGGCTTGAGGAACATAATAACTACGGTGTTGATTTTATTGAAGCCTGTAAGGAGATTAAAGAAATAATGCCGCTGGTAAATATCAGCGGTGGCGTGAGCAACCTTTCTTTCTCTTTCCGGGGTAACGAGCCGGCGCGCGAAGCCATGCACGCCGTGTTCTTATTTCATGCTATAAAAGCCGGTATGAGCATGGGCATTGTCAATGCAGGGCAGTTGGCAGTGTATGATGAAATAGAACCGCAGTTACGGGAGCTTTGCGAAGACGTTATATTGAACCGCAACAATGAAAATAATGAGGCCACAGAAAAATTATTGGCGTTTGCCGAAACGGTAAAAGCCAAAGGCAAAGAAGTAAAAAAAGACGATGCGTGGCGCAATACAACTGTTGAAGAAAGGCTGAAACACGCGCTGGTAAACGGTATTACAGATTATATTGATGAAGACACAGAAGAAGCGCGTTTAAAATATCCGCGCCCGTTAGAGGTGATTGAAGGCCCGTTAATGGCAGGGATGGATGTAGTGGGTGATTTATTTGGTGCGGGAAAAATGTTTTTGCCGCAGGTGGTTAAAAGTGCGCGGGTAATGAAAAAAAGCGTCGCCTGGCTTTTACCATTTATTGAGCAGGAGAAAATTGACAACCCCGAAGCTGAACAACATAGCGCTCCCCTTATCTTGCTCGCTACCGTAAAAGGCGATGTGCATGACATTGGTAAAAACATTGTTGGCGTTGTATTAGGATGCAATGGCTACAACGTAATGGATCTGGGCGTAATGGTTCCGGCCGATAAAATATTAGACACTGCCATCAAGGAAAAGGCTGACATCATAGGCCTCAGCGGGCTCATCACCCCTTCTTTAGATGAAATGGTACATGTGGCGCATGAAATGAAAAGGCGCGATATGAAACAACCATTATTAATTGGCGGCGCTACCACATCGCGTATGCACACGGCTGTAAAAATTGCCCCGCAGTTTGATAAAGGTGTGATACATGTGTTAGATGCATCGCGCAGCGTAACAGTGGCCGGTTCTCTTTTAAATCCTGAACAAAAACCGGCGTTTTTATCTGCCATCAAAAGTGAATATGATAAACTGGCCGAAGACTTTGCGAGCAAAAAAACGTTCAAGCAGTATCTCCCATTAAGCGACGCACAAAAAAATGGCACTGCAATTGACTGGGCTGATTACGAACCAACTGCTCCATCGTTTACGGGAACTAAAGTTTTTCAAAATGTTGATTTATCTGAACTCAGAAAATATATTGACTGGCAACCTTTCTTTATCGCCTGGGAACTTCATGGCCGTTTTCCGCAGATCCTGGAAGACAAAGTTGTGGGTGTGGAAGCCACAAAATTGTATAATGATGCCAACGCCCTAATTGACCAGATCATTGCTGAAAAATGGCTGACGACAAAGGGCGTAACCGGTTTTTGGCCGGCTGCAAAACTTTCTCCTGATACCGTTTTGGTGAATAACGATGGTAAAGAAATAAAATTGGAATTTCTACGCCAGCAACAAAAGAAGGCTGCGGGGCAACCCAATTATAGCTTGGCAGATTTTATAAAACCATATAGCCCGGCTCCACAACCCGGCGAGAACATTGAAGATGCCGCTAAAGCCCCTTCCCGAGGGGATGAGGGGCAAGACTACATTGGCGCGTTTTCCGTTACCATTTCGGGCATTGAATCCCATTTAGAACGATTTATTGCCGACCATGATGACTATAATAAAATAATGCTACAAGCGCTCGCAGACAGGTTTGCGGAAGCCTTTGCAGAATACCTGCATGAAAAAACAAGGAAAGAATTGTGGGGTTATAATAAAAACGAAACGCTGGACAACGAAGATCTTATTAAAGAAAAATATCAGGGCATCCGGCCGGCTCCCGGCTATCCCGCATGTCCGGATCACACTGAAAAATACAAACTGTTTGAGCTTTTAGGTGGCGAAGAAAATACCGGTATTCATCTTACAGAATCTTTAGCCATGTATCCCGCAGCCTCCGTTTGCGGTTGGTATTTCAGCCATCCTCAAAGCAAATATTTTGGCGTTGGCAAAATTCAGCCGGATCAGTTTGAAGATTACGTGCAGCGCAAAGGCATGAGCGAAGATGAAATGAAAAGATGGTTAAGGCCGGTCATGGAGTAA
PROTEIN sequence
Length: 914
MKQIQSYLTLSGLEPLIVRPESNFINVGERTNVTGSKKFARLIRENKYEEALSVARQQVENGAQIIDINMDDALLDGVQAMTTFLNLVQSEPDIAKVPVMIDSSKFEIIEAGLKCVQGKCVVNSISMKEGEEKFIEQAIICKSYGAAVIVMAFDEKGQADTKERKVEISHRAYKILTEQVGFAPQDIIFDPNIFAIATGLEEHNNYGVDFIEACKEIKEIMPLVNISGGVSNLSFSFRGNEPAREAMHAVFLFHAIKAGMSMGIVNAGQLAVYDEIEPQLRELCEDVILNRNNENNEATEKLLAFAETVKAKGKEVKKDDAWRNTTVEERLKHALVNGITDYIDEDTEEARLKYPRPLEVIEGPLMAGMDVVGDLFGAGKMFLPQVVKSARVMKKSVAWLLPFIEQEKIDNPEAEQHSAPLILLATVKGDVHDIGKNIVGVVLGCNGYNVMDLGVMVPADKILDTAIKEKADIIGLSGLITPSLDEMVHVAHEMKRRDMKQPLLIGGATTSRMHTAVKIAPQFDKGVIHVLDASRSVTVAGSLLNPEQKPAFLSAIKSEYDKLAEDFASKKTFKQYLPLSDAQKNGTAIDWADYEPTAPSFTGTKVFQNVDLSELRKYIDWQPFFIAWELHGRFPQILEDKVVGVEATKLYNDANALIDQIIAEKWLTTKGVTGFWPAAKLSPDTVLVNNDGKEIKLEFLRQQQKKAAGQPNYSLADFIKPYSPAPQPGENIEDAAKAPSRGDEGQDYIGAFSVTISGIESHLERFIADHDDYNKIMLQALADRFAEAFAEYLHEKTRKELWGYNKNETLDNEDLIKEKYQGIRPAPGYPACPDHTEKYKLFELLGGEENTGIHLTESLAMYPAASVCGWYFSHPQSKYFGVGKIQPDQFEDYVQRKGMSEDEMKRWLRPVME*