ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2846_3

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_41_5

near complete RP 46 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: 2168..2902

Top 3 Functional Annotations

Value Algorithm Source
LytR family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00037F38C9 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 244.0
  • Bit_score: 425
  • Evalue 5.10e-116
  • rbh
LytR family transcriptional regulator {ECO:0000313|EMBL:AHF15808.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 244.0
  • Bit_score: 420
  • Evalue 1.40e-114
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 249.0
  • Bit_score: 317
  • Evalue 2.80e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 735
ATGAACAAAGTAGTAATTATTGACGATGAATTTTTAGCCCGCAGCATGGTTAAAGAATACCTGCTGAAGCATCCCGAATTTGAAGTGGTGGCGGAATGCGGCGATGGGTTTGAAGGTTTAAAAGCTATTCAGGAGCACGAGCCGAACCTGATCTTTCTTGACATTCAAATGCCCAAAATCAGCGGGTTTGAAATGCTGGAACTGGTAGATGAACCACCTGCGGTAATTTTTGCCACTGCCTTTGATGAATATGCCATCAAGGCTTTTGATGCGCACGCCATCGACTATCTTTTAAAACCTTTCGACCAGGAAAGGTTTGATAAAGCTATCGGCAAATTTCTGGTGCAGCATAAAAATGATAATTCGGCAACAAAAGACCTGTTGAACGATGCGCAGCTTCCCAACATTAACAACAGGATTGTGGTTAAGAACGGAAGTAAGATCAAGATCATTCCCGTGCAAGAAGTTCTATATCTGGAAGCGGCAGACGATTTCGTAAAAATTTTCACGAAGGACGGCTATTATCTCAAAAATAAAACCATGGCATTTTTTGAATCCTTTTTGCCGCAGGATATGTTTGTGCGCAGCCACCGGTCATTTATCGTAAACATTGGCGAAATTACCCGCATTGACCCTTACGAAAAAGACGGCCATGTTGCGGTGCTGAAAAACGGCGCTAAAATAAACGTGAGCCGTAACGGGTACGGTAAGTTGAGGGATGTTTTGGGATTGTGA
PROTEIN sequence
Length: 245
MNKVVIIDDEFLARSMVKEYLLKHPEFEVVAECGDGFEGLKAIQEHEPNLIFLDIQMPKISGFEMLELVDEPPAVIFATAFDEYAIKAFDAHAIDYLLKPFDQERFDKAIGKFLVQHKNDNSATKDLLNDAQLPNINNRIVVKNGSKIKIIPVQEVLYLEAADDFVKIFTKDGYYLKNKTMAFFESFLPQDMFVRSHRSFIVNIGEITRIDPYEKDGHVAVLKNGAKINVSRNGYGKLRDVLGL*