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SCNpilot_cont_500_bf_scaffold_2133_7

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 ASCG 12 / 38
Location: 5238..5519

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit beta n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB57A similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 92.0
  • Bit_score: 154
  • Evalue 4.90e-35
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 92.0
  • Bit_score: 153
  • Evalue 1.50e-34
ihfB; integration host factor beta subunit; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 92.0
  • Bit_score: 146
  • Evalue 3.20e-33

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGATCCGATCCGAACTCGTCCAGCAGCTCGCAGAGACCAATCCCGAGCTTTCGTTGCGTGAGGTCGAGGAGATCGTATCAACCTTCTTCGACGAGATCGTGCGACGGCTGGCCGAGAATGGTCGGGTCGAGCTGCGCGGTTTCGGCGCTTTTTCCACCCGCGCCCGCGATGCGCGCACCGGGCGCAACCCGCGCACCGGGGAGATGGTGGACGTGGACGCGAAGCGCGTTCCCTACTTCAAACCCGGCAAGGAAATGCGCCAGCGGCTCAACGTCGCTTGA
PROTEIN sequence
Length: 94
MIRSELVQQLAETNPELSLREVEEIVSTFFDEIVRRLAENGRVELRGFGAFSTRARDARTGRNPRTGEMVDVDAKRVPYFKPGKEMRQRLNVA*