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SCNpilot_cont_500_bf_scaffold_2133_12

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 ASCG 12 / 38
Location: 9439..10776

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1219049 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 444.0
  • Bit_score: 789
  • Evalue 3.40e-225
rimO; ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 445.0
  • Bit_score: 769
  • Evalue 4.80e-220
  • rbh
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Sphingomonas sp. S17 RepID=F3WUJ6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 444.0
  • Bit_score: 790
  • Evalue 6.50e-226
  • rbh

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGGCAACCAAACTCCCCTCCCCGCCCCGCGTGGGCATGGTTTCGCTCGGCTGTCCGAAGAACCTCGTCGACAGCGAGCGCATCCTCACCCAGCTGCGCGCCGACGGCTATCAGATGTCGCCCGACTATGCCGGGGCCGATGTCGTGCTGGTCAACACCTGCGGCTTTCTCGATTCGGCCAAGGAGGAAAGCCTCGAGGCGATCGGCGAGGCGATCGCGGAGAACGGCCGCGTCATCGTCACCGGCTGCATGGGCAAGGAAGCCGAGGTGATCCGCGCGCGCTTCCCCGATGTGCTCGCGATCACCGGCGCGCATGAGTATGAGCAGGTCGTCGAGGCGGTGCACGAGGCCGCGCCGGCGAGTATCTCGCCCTATGTCGATCTGATCCCCGATGCGGGGCTCAAGCTCACCCCGCGCCATTACAGCTATCTCAAGATTTCGGAGGGCTGCAACCACCGCTGCGCCTTTTGCATCATCCCCTCGCTGCGCGGCGATCTGGTCAGCCGGCGTCCCGATGCTATCCTGCGCGAGGCGGAAAAGCTGGTCGCGGCGGGGACCAAGGAATTGCTGGTCATCAGCCAGGATACCTCGGCCTACGGCGTCGATCTGCGCCACAAATCCTGGCCGTGGAAGGGCGGCGAGGTGCGCGCGCATATGACCGACCTGGCGCGCGAGCTCGGCCGGATCGCGCCCTGGGTGCGGTTGCATTACGTCTATCCCTATCCGCACGTCGATCAGGTGATCCCGCTGATGGCGGAGGGGCTGGTGCTGCCCTATCTCGACATTCCGTTCCAGCACGCCAGCCGCGCGGTGCTCAAGGCGATGAAGCGCCCGGCGAACGAGGCCAAAGTGCTCGAACGGATCCGCGGCTGGCGCGAGATCTGCCCCGATATCGCGATTCGCTCGACCTTCGTCGTCGGCTTCCCCGGCGAGACCGAGGACGATTTCCGCTATCTGCTCGACTGGCTCGACGAGGCGCAGCTCGATCGCGTCGGCGCGTTCCGCTTCGAGCCGGTCGAGGGCGCCGCGGCCAATGCGCTGCCCGATCCGGTCCCCGAGGCGGTGAAGGAAGAGCGCTATGCCCGGGTGATGGAGAAAACCGCGGCGATTTCCGCCGCCAAGCTGCAGGCGAAGATCGGGCGCACGCTGGAGGTGATCATCGACGCGGTGGGCGAAGACGGCGGCGCGACCGGCCGTTCGGCCGCCGATGCGCCCGATATCGACGGCGAGGTGAATCTGCGCGACGCTGGCAGCCTGTCGCCGGGCGATATCGTCAAGGTGACGATCGAGGACGCCGACGACCACGATCTGTTCGGCGCGCCGGTGTCTGCGCCCTAA
PROTEIN sequence
Length: 446
MATKLPSPPRVGMVSLGCPKNLVDSERILTQLRADGYQMSPDYAGADVVLVNTCGFLDSAKEESLEAIGEAIAENGRVIVTGCMGKEAEVIRARFPDVLAITGAHEYEQVVEAVHEAAPASISPYVDLIPDAGLKLTPRHYSYLKISEGCNHRCAFCIIPSLRGDLVSRRPDAILREAEKLVAAGTKELLVISQDTSAYGVDLRHKSWPWKGGEVRAHMTDLARELGRIAPWVRLHYVYPYPHVDQVIPLMAEGLVLPYLDIPFQHASRAVLKAMKRPANEAKVLERIRGWREICPDIAIRSTFVVGFPGETEDDFRYLLDWLDEAQLDRVGAFRFEPVEGAAANALPDPVPEAVKEERYARVMEKTAAISAAKLQAKIGRTLEVIIDAVGEDGGATGRSAADAPDIDGEVNLRDAGSLSPGDIVKVTIEDADDHDLFGAPVSAP*