ggKbase home page

SCNpilot_cont_500_bf_scaffold_1996_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 ASCG 12 / 38
Location: comp(43..660)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B510EC similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 205.0
  • Bit_score: 363
  • Evalue 2.00e-97
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 209.0
  • Bit_score: 313
  • Evalue 2.60e-82
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 209.0
  • Bit_score: 295
  • Evalue 9.50e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGAAGGTCAAGGTTTCCTCCTTCGACGCCAAGGCGAAGGCCGCGGAAGTCGAGCTTTCGGATGAGGTGTTCGGCCTCGATCCGCGTGCCGACATCCTGCACCGCGTCGTCACCTGGCAGCTCGAAAAGCGCCGCGCCACCGCGCGCGGCACGCGTGAGCGCGCCGATGTCGCCCGCTCGGGCAAGAAGCTCGGTCGCCAGAAGGGCGGCGGCGTCGCCCGTCACGGCGATCGCCGGGCGCCGGTGTTCATCGGCGGCGGCAAGGCGCACGGCGCTCGTGTTCGCGACTTCAATCCGTCGCTGAACAAGAAGATCCGCGCGCTGGGCCTCAAGATGGCGCTGTCGAGCCACGCCAAGGCGGGTTCGCTGATCGTCCTCGACGGTTTCCAGGTCGACAAGACCAAGGAGCTGAAGGGCCATTTCGAGACGCTGGGCGTTGGCAAGCGCACGCTGGTGATCGATGGTGAGGCTGGCGTGGGCTTCCGCTCCGCGCGCAACCTCCCGGGTGTCGACCTGCTGCCGGCCGTCGGCGCCAACGTCTATGACATCATCAAGGCCGACACGCTGGTGCTTACCCGCGCTGCGGTCGAGAAGCTGGAGGCGCGCTTCAATGGCTAA
PROTEIN sequence
Length: 206
VKVKVSSFDAKAKAAEVELSDEVFGLDPRADILHRVVTWQLEKRRATARGTRERADVARSGKKLGRQKGGGVARHGDRRAPVFIGGGKAHGARVRDFNPSLNKKIRALGLKMALSSHAKAGSLIVLDGFQVDKTKELKGHFETLGVGKRTLVIDGEAGVGFRSARNLPGVDLLPAVGANVYDIIKADTLVLTRAAVEKLEARFNG*