ggKbase home page

SCNpilot_cont_500_bf_scaffold_1996_26

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 ASCG 12 / 38
Location: 20788..21675

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F1540 similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 295.0
  • Bit_score: 459
  • Evalue 3.00e-126
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAM00272.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 295.0
  • Bit_score: 448
  • Evalue 7.30e-123
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 296.0
  • Bit_score: 339
  • Evalue 1.40e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCGACTGCCGGACCTCGAAGCCTGGGCGACCTTCGCCACCGTGGCGGATCACAGTTCGTTCAGCGCCGCCGCCACCGCGATGGGGGTTTCCAAGGCGACCGTGTCCAAGGCGGTGGCGCGGCTCGAAGCGTCGCTCGGCCAGTCGCTGTTCCACCGCACCTCGCGCCGGCTGACGCTGACCGAGGCGGGCAAGCCGCTCGCCGAACGCGCGCAGCGCATGTTGGCGGAAGCGGTGGCGGCGGAGGAGGCGGCGCACGATGCCGCCTCGGCCCCCGCGGGCCGGCTGCGCGTCGCCGCGCCGATGACCTTCGGGGTCACGCATGTCGCGCCGCTGATCGCCGAATTTCTCGCCGCGCATCCCGCGATCGAGATCGAGCTCGCTTTGTCCGACGCGCGGGTCGATATCGTCGCCGAGGGGTTCGATGTCGCGCTGCGCATCGCCGAATTGCCCGATAGTTCGCTGCGGGCGCGGCGGCTGCGCAGCGTCGCCTCGCATATCGTCGCCGCGCCGGCCTATCTCGAACGCTACGGCACCCCGCGCCACCCGGGCGAATTGGGCGACCACCGCCTTCTCGGCTACACCAACGTCACCGGCCCCTGGCGCTTCCGCGGGCCGGGCGGGGCGGAGGTCGCGGTGCGCGCGAGCGGGCCGCTTGCCGCCAACAGCGGCGATTCGCTGATGCCGGCGCTGATCGCCGGGCTCGGCATCGCGCGCCTGCCCGATTTCATCCTCGGCGACGCGCTCAACGACGGGCGGCTGACCGAGATTCTCCCCGAATGGCGCCCCGCCCCGGTCGGGCTGCATTTGCTCACCCCGCCCAGCCCGTTGCGTCCCGCGCGGGTCGAGGCGCTGATCGCATTCCTTTCGGAACGATTGCACGACTGA
PROTEIN sequence
Length: 296
MRLPDLEAWATFATVADHSSFSAAATAMGVSKATVSKAVARLEASLGQSLFHRTSRRLTLTEAGKPLAERAQRMLAEAVAAEEAAHDAASAPAGRLRVAAPMTFGVTHVAPLIAEFLAAHPAIEIELALSDARVDIVAEGFDVALRIAELPDSSLRARRLRSVASHIVAAPAYLERYGTPRHPGELGDHRLLGYTNVTGPWRFRGPGGAEVAVRASGPLAANSGDSLMPALIAGLGIARLPDFILGDALNDGRLTEILPEWRPAPVGLHLLTPPSPLRPARVEALIAFLSERLHD*