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SCNpilot_cont_500_bf_scaffold_124_150

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(145624..146481)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2CYS6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 284.0
  • Bit_score: 444
  • Evalue 9.50e-122
  • rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KEA09199.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 285.0
  • Bit_score: 445
  • Evalue 4.60e-122
dppCch1; dipeptide ABC transporter; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 284.0
  • Bit_score: 443
  • Evalue 3.90e-122
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGATTGCGGCTCTCGCCAAAGCAAGCAGGTTCGCCGGAAGACCGCCGCTATCGGTCGTAATGTCAGTGGTGATCCTGATAGTCATCGTCCTTGCGGCTATACTCGCTCCTCTGATCGCTCCTTATGATCCGAATGCGCAGAACCTTCTCGGACGCCTGAAGCCGCCTGGCACGCTTGCCCGTGCAACGCATTTCCTGCTCGGCTCCGATGAATTGGGGCGCGATACGTTGAGCCGTCTGATCTATGGAGCGCGCGTCTCGCTTCTCGTCGCGTTCACGTCCGTATTGCTGTCTGGCATTGCCGGCTGTATTTTCGGAATGCTCGCGGCCTTTTATCGCGGCTGGGTCGAGACCGTGATCATGCGCCTCGTCGACATCGTGCTTTCTGTGCCGGCCATACTGCTTGCCATCATCACTGTCGCAACGCTTGGGCCGGGCCTGCAGAATGTCGTTCTCGTTCTGGCTCTTACACGCTGGCCGCGTTACGCGCGCGTTGCCTATGCTCAGACCCTGATTATCACCAATATGTCCTATCTTCGGCTTTCGCGTGCGATGGGGGCCGGATGGCTGCGGGTGTTGCGATATCACATCCTGCCGAATATCGCGGGCGCGCTCGTCGTCGTCGCCACGCTTGAATTCGGCCTGATGGTGCTGTTCGAAGCAGGATTGTCCTTCCTCGGTCTTGGCGTTCAGCCGCCGACCGCAAGCTGGGGGGCGATGCTTTCGGTCGGCCGCAACTATGTCGCCAATGCCTGGTGGCTTTCCGTCATGCCGGGGCTGGCGCTTTTCCTTCTTGTTTTGTCCGTCAACGTTCTGGGCGATTTCCTGCGGGACCGCCTTGACCCAAGGAGTGCGTAA
PROTEIN sequence
Length: 286
MIAALAKASRFAGRPPLSVVMSVVILIVIVLAAILAPLIAPYDPNAQNLLGRLKPPGTLARATHFLLGSDELGRDTLSRLIYGARVSLLVAFTSVLLSGIAGCIFGMLAAFYRGWVETVIMRLVDIVLSVPAILLAIITVATLGPGLQNVVLVLALTRWPRYARVAYAQTLIITNMSYLRLSRAMGAGWLRVLRYHILPNIAGALVVVATLEFGLMVLFEAGLSFLGLGVQPPTASWGAMLSVGRNYVANAWWLSVMPGLALFLLVLSVNVLGDFLRDRLDPRSA*