ggKbase home page

SCNpilot_cont_500_bf_scaffold_433_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 6248..7069

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase; K03335 inosose dehydratase [EC:4.2.1.44] similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 270.0
  • Bit_score: 443
  • Evalue 4.90e-122
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 270.0
  • Bit_score: 448
  • Evalue 3.70e-123
Xylose isomerase {ECO:0000313|EMBL:AII86759.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 270.0
  • Bit_score: 455
  • Evalue 5.50e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Planktomarina temperata → Planktomarina → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGTCTGATTGGAAACTGGCTTATCACGCCAATTGCTGGGGTGCGCTTGGCGGAAACGCCCAAGGGGTCACCTCCATCGCGGAATTAAGCTACCGCACATTTGGCGACATGGACCGCGCTCTAAGCGAAATTGCCGCTGCTGGATATGAAGGCGTCGAACTTTTCGACGGCAATCTTCTCGACTTTAGCGCGACCGACCTTCGCAAGGTGCTGGCGGATACGGGCCTGACGCTTGTCGCAACCTATGCCGGCGGTAATTTCATCTTCGACGATATCCTGAGCGAGGAGCTGGCCCGGGTGGTTCGTGCCGCCGATCGCGCTGCCGAACTCGGGGCGCCGCATCTGGTCGTCGGCGGTGGCGCGAAACGTTTCGATGGCATTCGCGATACCGATTACAAGAAACTGGGCGCCGCCCTCGACGAGGTCAAGACCATTGCGGAAGAGCGCGGCATGCGCGGCCACTATCATCCGCACCTGTCGACCATCGTCGAAGGGCCCGAGACGGTGCGGCGCATCTTCGGCCTGACCGAAATCGACTTCTGCCCCGATACTGCACATCTGGCGGCAGCCGGCGGCGATCCGGCCGCTCTCATCCGCGAGCATGCAACCCGCATTTCCTATGTGCATCTCAAGGGTTTCCAGCAGGAGCCTTTCGCCTTTACGCCGCTCGATCGTGGTGATGTGCCAACCGGCCCGATTCTGTCTGCAATGCGCGAAACCGGCTTCAAGGGCTGGGTCTGTACCGAACTCGACGCTTGGTCGGACCCCGCCGAAGGGGCGCGGGCCAGCATGGATTATCTGAAGACTGCAATGCGCTCCTGA
PROTEIN sequence
Length: 274
MSDWKLAYHANCWGALGGNAQGVTSIAELSYRTFGDMDRALSEIAAAGYEGVELFDGNLLDFSATDLRKVLADTGLTLVATYAGGNFIFDDILSEELARVVRAADRAAELGAPHLVVGGGAKRFDGIRDTDYKKLGAALDEVKTIAEERGMRGHYHPHLSTIVEGPETVRRIFGLTEIDFCPDTAHLAAAGGDPAALIREHATRISYVHLKGFQQEPFAFTPLDRGDVPTGPILSAMRETGFKGWVCTELDAWSDPAEGARASMDYLKTAMRS*