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SCNpilot_cont_500_bf_scaffold_27_19

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(24998..26152)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 369.0
  • Bit_score: 446
  • Evalue 4.70e-122
two-component system NtrC family nitrogen regulation sensor histidine kinase GlnL (EC:2.7.13.3); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 353.0
  • Bit_score: 442
  • Evalue 1.50e-121
  • rbh
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIZ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 353.0
  • Bit_score: 443
  • Evalue 2.20e-121
  • rbh

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGCGCCCGATCAGCCCGACGTCATTCCCCCCGCGCCCGACGCGCGGCGCATGTTGCTCAGCCTGCCTCAGGCGGTGATGCTGCTGGCGCCGGGGCAGAAGATCTCGATGGCCAATCCGGCCGCCGAGCAGTTTCTGGGCCAGAGCCAGCGCCGCCTGCTGGGGCGTTCGCTGGTCGATGTCGTGGCGCTGGATGATGAACGCCTGATGCAGCGCGTCTATGAAAGCGATGCGCCGATCACCGCGCGACAGGTCGATGCCCACGTTCTGGGCCAGGGCAGCCGGCGGCTCGACATTGCCACCACGCCGGTGATGGATGCGCCGGGCTGGATGATGGTCACTCTGGCCGACAGCGCCACGGTCGAGCCGCTGGGCCAGTCGATGCCGGGCGATGGCGACGGGCGGCTGCGCGGGCCGGAGGTGCTGGCCCATGAGATCAAGAACCCGCTGGCGGGCATTCGCGGGGCGGCGCAATTGCTGGCGCGCAAGGTGGAGGGCAGCGACCGTGCGCTCACCATCCTGATTGCGGATGAGGTGGATCGCATCGCCAAGCTGATCGACCAGATGCAGACGCTTTCGCGCCGCACCGCCGATCCGGTCGAGCCGTGCAACCTGCATGAAACCATCCGCCGCGCCAGCACTATTCTGGCCGCCGCAGGCGGGGCCAAGGAGGAAGGCAGGACGCGGATCGAGGAAGAATTCGACCCCTCGCTGCCCCCCGTTCTGGGCAGCGCGCATGGGCTGGTGCAGGTGCTTATCAACCTGCTCTCCAATGCGCGCGAGGCGACGCAGGGCGTGGAAAATTCGCGTATCATCGTGCGCACCCGCTTCGTTTCGGGTCTGCAACTGCATGCCACCGATCGCGGCAAGGCGGTGCGTCTGCCCATCGAGGTGCGCGTGTCGGACAATGGCCCCGGCGTCGATCCTTCGGTGCGCGACCAGATTTTCGAGCCTTTCGTCACCAGCAAAAAGACCGGGCAGGGGCTGGGTCTGGCGCTGGTGCGCAAATTGATGCGCGACATGAACGGACGCATCACCCATGACCGCGACGAGGCGGGGGGCTGGACTCATTTCCGCCTGCATCTGCCGATGGCCTCGCCGGGCGGATCGGGCAGGCCTCGGCGCAAATCGGCCCCAGACGCCCTGAACGGATAG
PROTEIN sequence
Length: 385
MAPDQPDVIPPAPDARRMLLSLPQAVMLLAPGQKISMANPAAEQFLGQSQRRLLGRSLVDVVALDDERLMQRVYESDAPITARQVDAHVLGQGSRRLDIATTPVMDAPGWMMVTLADSATVEPLGQSMPGDGDGRLRGPEVLAHEIKNPLAGIRGAAQLLARKVEGSDRALTILIADEVDRIAKLIDQMQTLSRRTADPVEPCNLHETIRRASTILAAAGGAKEEGRTRIEEEFDPSLPPVLGSAHGLVQVLINLLSNAREATQGVENSRIIVRTRFVSGLQLHATDRGKAVRLPIEVRVSDNGPGVDPSVRDQIFEPFVTSKKTGQGLGLALVRKLMRDMNGRITHDRDEAGGWTHFRLHLPMASPGGSGRPRRKSAPDALNG*