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SCNpilot_cont_500_bf_scaffold_121_29

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 44023..44697

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039A8A76 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 225.0
  • Bit_score: 294
  • Evalue 1.20e-76
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 223.0
  • Bit_score: 283
  • Evalue 6.90e-74
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD25951.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 223.0
  • Bit_score: 283
  • Evalue 3.10e-73

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAACCGGGTTCTGGTGGTGGATGATGAACCGGCGATCCTGCGCCTGCTGGGCGCGGTGCTGGCGCGCGGGGGCTATGAGGCGGCGACGGCGGCCACGGCATCGGCGGCGCTGGCGGCGTTGCGCGGTGGCGGGCTGTCGGCGGCGATCCTCGATCTGGGCCTGCCGGATCGCGACGGGCTGGAACTGATCCCGATGTTGCGCGGGGCGGGGGTGCCGGTGATCGTCCTTTCCGCGCGTGAGGATGTGGCCGAGAAGGTGGCCGCGCTCGATCTGGGCGCATCCGACTATATCACCAAGCCCTTTGACGGCGAGGAATTGCTGGCCCGGCTGCGCGTGGCGCTGCGGCAATCGGGCGCAGCGGCGGCGCAGGAAGTGCTTGCCCATGGCCCCTTTCGCATCGACACCGCCCGTCATGAGGCCAGCATCGAGGGCCGCGCGCTGACCCTGCCGCCCAAGGAATTCGCCCTGCTTCAGGCGCTGGTCGAGGCGGGCGGGCGCATTCTCACTCATGCCGCCTTGCTGGAAAAGGTCTGGGGGCGGGCGCATGTGGGCGATGTCGAATATTTGCGCGTGGCGATCCGCGCCTTGCGGCTGAAGGTTGAAGAGGATCCGGCCCACCCCCGCCTGATCCGCAACGAACCGGGCATCGGCTATCGTTTGATGGAGGCCTGA
PROTEIN sequence
Length: 225
MNRVLVVDDEPAILRLLGAVLARGGYEAATAATASAALAALRGGGLSAAILDLGLPDRDGLELIPMLRGAGVPVIVLSAREDVAEKVAALDLGASDYITKPFDGEELLARLRVALRQSGAAAAQEVLAHGPFRIDTARHEASIEGRALTLPPKEFALLQALVEAGGRILTHAALLEKVWGRAHVGDVEYLRVAIRALRLKVEEDPAHPRLIRNEPGIGYRLMEA*