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SCNpilot_cont_500_bf_scaffold_290_28

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 31366..32172

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 269.0
  • Bit_score: 189
  • Evalue 5.60e-45
shikimate/quinate 5-dehydrogenase id=18316450 bin=Nanosalinarum tax=Nanosalinarum similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 268.0
  • Bit_score: 199
  • Evalue 5.00e-48
shikimate/quinate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 275.0
  • Bit_score: 181
  • Evalue 3.40e-43

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GTGACCCGGACAATACCACAACTCTGCGGTTCGATTTCCAGCCGCGTTTCGCCAAGCGGCCTCGGCGTAAAAATGCACGAAGCAGGGTACCAGGCGGCGGGTGTCGATTTCAAATATGTTTCCGCCGAAACCCATGATTTGCGAGCCACCGTGGGCGCGTTTGTTGAGCTGGGCTTCCGCGGCTTCGCCGTGTCGATGCCTTTCAAGCGCGAGGTTCTCTCTTTACTTGCCGAGGTTTCGCCCGACACGCACGCGATTGGAGCTTGCAATACCGTCGTGAACAACGGCGGCTGGCTGACCGGGTACAACACCGATTGGCGCGGAGCGATGGATGCATTGCGGGAGTCGGGCGTTCATGAACCCGGACGCGCCCTCGTGATCGGTGCGGGCGGCGCAGCGAGGGCGTTGATTTTTGGTCTGAAGGAATCGGGCTGGCACGTCGAACTCGCGGCGAGAAACTTGGCTGCAGCAACTGCGGTTGCGACGGACTTCGATCTCCCCCGACCATGGAGCCATGATGCCGAAGTTATACCGGATATCGACCTTCTGGTGAACGCCACACCGAATATCGATATTTCAGAAGGTTTTCTTGCACCTGAGCGATTCCCGGACCTGAAGGCCGTATTCGACGTCGTTTTCAATCCTTCGGCTACACCGCTTTGCAATCAAGCTGCGCGCCTTGGCCTCATTTCAGTACCAGGCTGGCTCATGCTGCTGCACCAGGCCATGCACCAATTCGCCCTGTACACAGGGCTCGAGGCGCCGGCGGCAGCCATGCGTGACGCTCTGCTGAAAAATCTCCGGTGA
PROTEIN sequence
Length: 269
VTRTIPQLCGSISSRVSPSGLGVKMHEAGYQAAGVDFKYVSAETHDLRATVGAFVELGFRGFAVSMPFKREVLSLLAEVSPDTHAIGACNTVVNNGGWLTGYNTDWRGAMDALRESGVHEPGRALVIGAGGAARALIFGLKESGWHVELAARNLAAATAVATDFDLPRPWSHDAEVIPDIDLLVNATPNIDISEGFLAPERFPDLKAVFDVVFNPSATPLCNQAARLGLISVPGWLMLLHQAMHQFALYTGLEAPAAAMRDALLKNLR*