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SCNpilot_cont_500_bf_scaffold_92_8

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6114..6857)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K10004 glutamate/aspartate transport system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 409
  • Evalue 9.20e-112
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWS6_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 409
  • Evalue 2.90e-111
ABC transporter-related protein {ECO:0000313|EMBL:ACB36275.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 244.0
  • Bit_score: 409
  • Evalue 4.10e-111

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGAACGCAATGATCGAAATCAACGACGTCTCCAAGTGGTACGGCCAGTTCGCGGTGCTCACGGATTGCAGCACCCATGTTCGTGAGGGCGAGGTGGTCGTGGTCTGCGGCCCTTCCGGCTCTGGCAAGTCCACGCTCATCAAGACGGTCAACGCACTTGAGCCCATTCAACGCGGCAGCATCACGGTCAATGGTATCCAGGTCTGCGATCCCAAGACCGATCTACCGAAGTTGCGCTCCCGGGTCGGCATGGTGTTCCAGCACTTCGAACTCTTCCCACACCTGAGCGTGATGGAGAACCTCGTACTGGCGCAAGTTCAGGTGCTCAAACGCTCGCATGCCGAAGCAGTCGAACGCGGGCTGCGCATGCTCGATCGTGTGGGCCTGTCGACTCACAAGGACAAGTTCCCGGGCCAGCTCTCCGGTGGCCAGCAACAGCGCGTTGCGATCGCGCGGGCGCTGTCGATGGACCCGATCGTCATGCTGTTCGACGAGCCGACCTCGGCGCTCGACCCGGAGATGGTGGGCGAGGTCCTCGACGTCATGGTGAAGCTCGCACGCGAAGGCATGACGATGATGGTGGTGACCCACGAGATGGGGTTCGCCAGGCAGGTCAGCGACCGGGTGATCTTCATGGACCAGGGGCGCATCGTTGAGGACTGCTCGAGTGACGAGTTCTTCGGGCGTCCCGAGAGCCGGGCACCGCGTGCACAGGACTTCCTCTCCAAGATCCTCGCGCACTGA
PROTEIN sequence
Length: 248
MNAMIEINDVSKWYGQFAVLTDCSTHVREGEVVVVCGPSGSGKSTLIKTVNALEPIQRGSITVNGIQVCDPKTDLPKLRSRVGMVFQHFELFPHLSVMENLVLAQVQVLKRSHAEAVERGLRMLDRVGLSTHKDKFPGQLSGGQQQRVAIARALSMDPIVMLFDEPTSALDPEMVGEVLDVMVKLAREGMTMMVVTHEMGFARQVSDRVIFMDQGRIVEDCSSDEFFGRPESRAPRAQDFLSKILAH*