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SCNpilot_cont_500_bf_scaffold_39_26

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(24705..26009)

Top 3 Functional Annotations

Value Algorithm Source
Membrane spanning protein involved in lipopolysaccharide biosynthesis n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ETT3_CUPNN similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 422.0
  • Bit_score: 272
  • Evalue 7.50e-70
rfaL; membrane spanning protein involved in lipopolysaccharide biosynthesis similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 422.0
  • Bit_score: 272
  • Evalue 2.40e-70
Membrane spanning protein involved in lipopolysaccharide biosynthesis {ECO:0000313|EMBL:AEI78132.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 422.0
  • Bit_score: 272
  • Evalue 1.10e-69

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Taxonomy

Cupriavidus necator → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAGCCGTTCCATGCCCCAGCACGGCGGGCTGCCTGTCCCGCTGCTGTTTCTTTCCGCATTGGCCGTTTCCCTGGTACCCGCCCTTGCACTGTGGGTGCGGGGAAGCGCCAACCAGCTGCTGTTCCTGCTTCTGCTCTTCGCCCTGATCGGCACCGTGTGGCGCGGCCACCTGGCGCCCCAGGATCGCTTCATTCCCGTCGTCCGCCGGTACTGGCCGATCTGGGCCGCGCTGGCGGCGCAGTTCCTCGCAGCCTGTCTGAGCACCGTCGTGGTGGGCCTGCGCGATGCGCGCGTGTTCGACGATCCCAGCGTGCTCGATACGCCGCTGCGCATGGCGCTGTTCGGTCCGCTACTGTGGCTGCTGCTGAACGTGCCGCCGCGCTGGCTCAAACAGCTCCAATGGGGCTGCGTGGCCGGCGCGCTGATCGGTGCCGGCATCCTCCACCACCAGATCGGCCTGTCGCCCGACGGCCGGCCCGGACAGATCCTGTTCTCCAACCTGCTGCCGTTCAGCAATATCACGCTCCTGCTGGGCCTGTTCTCGCTGCTGACTCTGGGCTGGTCCGACCGCGCCACGGGGTGGGGCCGAATCGGCATCGCGCTGAAGCTGCTGGGCGGCGCGGCGGGCCTGTACGTCGCCTACGCCTCCGGCACGCGCGGCGGCTGGCTGGCGCTGGGAGCCTTCGCGCTGGTGTTCTTCTTCCTGATGCCGGGCCGCGTCTGGCGCAAGCTCCTTGGCATGGCGGCGCTTGCCTGCGCGGTGCTGGCCGTCTACCACGCCAGCGACTTGGTCAACCAGCGCGTGGACGAGGCCTATACGGAAATACAGGAGTATCGCAAGGGCCAGGCCCTCGACTCCTCGGTGGGCAACCGCCTGCAGCTCTGGTCAGCGGCGCTGGAAGTATTCGAAACCCACCCGCTGGTCGGCGTGAGCCGGCAGGATTACCGCCGCACGATGCGCGAAGCGGCCAAGCAGGGCTTGATTACCAAGCACGCCGCCGAATTCCGGCACTCGCACAACGAGTTCCTGTTCAACCTGGCCACGCTCGGCATCCTGGGAGGACTGGCGATCGCGGCGGCCTGGCTGGTTCCCGCCTTCTTCTTCGCGCGTGCCACACGCCGCGGCGGCCGCGATGAAAGAATCGCCGGCACCATGGGCCTGCTGCTGACGATCGGCTTCCTGGTATTCGGCATGACCGAGGTCATGTTCGCGATGTCGATGGTCGCCGCGTTCTACACCCTGATGATCGCGGCGCTGATGGCCATCGTGATACGCGCCGGCCGGGACGCTCCGGCCGCCTAG
PROTEIN sequence
Length: 435
MSRSMPQHGGLPVPLLFLSALAVSLVPALALWVRGSANQLLFLLLLFALIGTVWRGHLAPQDRFIPVVRRYWPIWAALAAQFLAACLSTVVVGLRDARVFDDPSVLDTPLRMALFGPLLWLLLNVPPRWLKQLQWGCVAGALIGAGILHHQIGLSPDGRPGQILFSNLLPFSNITLLLGLFSLLTLGWSDRATGWGRIGIALKLLGGAAGLYVAYASGTRGGWLALGAFALVFFFLMPGRVWRKLLGMAALACAVLAVYHASDLVNQRVDEAYTEIQEYRKGQALDSSVGNRLQLWSAALEVFETHPLVGVSRQDYRRTMREAAKQGLITKHAAEFRHSHNEFLFNLATLGILGGLAIAAAWLVPAFFFARATRRGGRDERIAGTMGLLLTIGFLVFGMTEVMFAMSMVAAFYTLMIAALMAIVIRAGRDAPAA*