ggKbase home page

SCNpilot_cont_500_bf_scaffold_75_23

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 24802..25365

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IF06_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 188.0
  • Bit_score: 232
  • Evalue 4.90e-58
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 188.0
  • Bit_score: 232
  • Evalue 1.50e-58
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACB94197.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 188.0
  • Bit_score: 232
  • Evalue 6.80e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGAAACGCCAGTCGAGATTGATTTTCAGGGAATGGCGCCAGTCGAGCAAATTCGTCGTTCGATCGAAACGCACGTTGCGGCTCTTGAGCAGCGGTACGGACGCATAACTGCATGCCGCGTTGCGTTCAAAGCACCGGGTGGCCACCATCGCAAGGGGCTCTACGAGGTTAGTCTCCGGCTCGCTCTACCAAATGGCCGGGAGGTCAACGTCGCACGCATGGCCTCCCAGGACGAGCGCTATACCGATGTAAATTTCGCCATCAATGATGCGTTCAAACGTGCACGGCGGCGCTTACAAGACCACGTTCGACGCATGCAGGGCCACATCAAGGAGCACGAAGCGCAGCCGATCGGCAAAGTGATCCGAATCAACCCAGAGGATGGATTTGGATTCCTGGAGACCGCAGACAAACGCGAGATCTATTTTCACAAGAACAGCGTACTCGATGGCGGATTTGCCCGTCTGTCCGTCGGTGCGCGGGTGGCATTCGCCGAAGAACAAGGCGAAAAGGGGCTGCAGGCAAGCACGGTCAGGTTATTGGGTAAACACGGCATGCGGTGA
PROTEIN sequence
Length: 188
METPVEIDFQGMAPVEQIRRSIETHVAALEQRYGRITACRVAFKAPGGHHRKGLYEVSLRLALPNGREVNVARMASQDERYTDVNFAINDAFKRARRRLQDHVRRMQGHIKEHEAQPIGKVIRINPEDGFGFLETADKREIYFHKNSVLDGGFARLSVGARVAFAEEQGEKGLQASTVRLLGKHGMR*