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SCNpilot_cont_500_bf_scaffold_75_28

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 30646..31425

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V752_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 259.0
  • Bit_score: 458
  • Evalue 3.40e-126
  • rbh
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:CEG09463.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 259.0
  • Bit_score: 458
  • Evalue 4.80e-126
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 249.0
  • Bit_score: 272
  • Evalue 1.80e-70

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGCGACCCCGTCCTTCGCACCGAGAATCTCACCAAGCGGTTCGGCGGGCTGACTGCCACCGATAACCTCAGTCTCAGTCTGCGTGGGGGGCGGCTGCAGGCCGTCATCGGCCCCAATGGTGCCGGCAAGACGACATTCTTCAATTTGATTTCAGGATTGCTGAAGCCAGACAGTGGGCGCGTCTTCTTCCGTGATCGCGATATTACCGGTCTGCGGCCGCATGAGATCAGCCGTCTCGGGATCAAGCGAACGATGCAGATCAAGAGCGTCTTCAATCAGATCAGCGTCATGGAGAACTTGTGGATCACGCGGCAGGCATCGCAGCGCTTTTTGCATCCGTTCCGGCCCGCATCGCGCGATCGCGCCACCCGCGAGCGTGTCGAGCAAGTGCTCGAGCAGATCGGCATGACGGCCCTCGCGCACCGTATCGCCGGTACGTTGTCTTATGGAGACGTAGCGATGCTCGAGATTGGGATGGCCCTGATCTCGGAGCCCAAGCTCTTGCTGCTCGATGAGCCGATCTGCGGCATGAGTCCGGCGGAAACCGAACGCGCCGTCGCGAAAATCCGCGAACTGGCGCGTCAGGTCGACATCGTGATTATCGAGCACGACATGGAGGTGGTGTTCGGCCTCGCCGATGACATTACAGTGTTGGCGCAGGGGGCCATTCTCGCGACCGGAAGTCCGGAAGAAATTTCCAACCATGAACGGGTGCGTGAAGCGTATCTCGGCCGCCCGGAGGACGAAGACTATCTCGAGGAGGCGGCCGATGCTTAG
PROTEIN sequence
Length: 260
MSDPVLRTENLTKRFGGLTATDNLSLSLRGGRLQAVIGPNGAGKTTFFNLISGLLKPDSGRVFFRDRDITGLRPHEISRLGIKRTMQIKSVFNQISVMENLWITRQASQRFLHPFRPASRDRATRERVEQVLEQIGMTALAHRIAGTLSYGDVAMLEIGMALISEPKLLLLDEPICGMSPAETERAVAKIRELARQVDIVIIEHDMEVVFGLADDITVLAQGAILATGSPEEISNHERVREAYLGRPEDEDYLEEAADA*