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SCNpilot_cont_500_bf_scaffold_345_2

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 603..2168

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor rpoN n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1F8_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 492.0
  • Bit_score: 856
  • Evalue 1.90e-245
  • rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIA82975.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 492.0
  • Bit_score: 862
  • Evalue 2.90e-247
RNA polymerase sigma-54 factor rpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 492.0
  • Bit_score: 856
  • Evalue 6.00e-246
  • rbh

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1566
TTGAGCTGTGCAGTAATCATTCAAACAAAAAAACAGCACAAAAGTGATCAGTCTCCATCAAAAGAAAAAAGGAAAAACCACATTCCGATGCTAAAACAAAACTTACAGATAAGACTCGGCCAAAAGCTTGCTCCCCAGCAAATCCAGCTCATGAAATTGATCCAGCTGCACACGCTGGAATTTGAGGAAGAGCTGGAGCGAGAGCTAGAAGAAAATCCTGCCCTTGAGAAAGTTCAGGATGAGGATAAAGACGAAGATTTTGCCGGTGACGATGATGGTTTCGAAACAGAAGGAACCGAAAGCATCGATACCGATTTTGATGTTGATGAGTATATTTTTGATGATGAACCAGCCTATAAAACGGCATCCAGCAATTATTCTGCAGACGATGAAGAGTTCGATAATGAGTCCCTTTTAACAGAAGGAACCTCTCTGTACGACTATCTTCTGGAGCAGATTAATCTGGTGAATATTGATGAAGAAGATTTAAAAATTGCAGAATACATCATCGGAAATCTTGATAATGATGGCTACCTTCGGCGTGAGATTAAACAGATTGTTGATGATTTAGCATTCTCCCTCGGTATATACACAACTCTTGAAAAAGTGACCGATATTTTGGAGAATTACGTCCAAAAGCTTGATCCTCCTGGTGTGGGCGCGAGAAATCTGCAGGAATGTTTGCTGCTCCAAATTGAGAAAAGAGTGACAGCTGATAAGGCGGTAATGCTTGCTGCCAATATTCTTCGAAATCAGTTCGACAGCTTAACCAATAAGCATTACAACAAAATTATTCAGAAGTACGATATTGAAGAAGAGGATCTGAAGGATGCATTGGAAGTAATATCCAAACTTTCTCCGAAGGTGGGTGGTAATTTCGATACGCAAACCATTACCATTAATCAGGAAATTATTCCCGATTTCGTTATTCAGCTTAAGGAAAATGGTAAAAAAGGAACCGATGTTATTGCATTGCTCAATAGTAAAAATGCCCCTACGCTACGTGTTTCTGATGAATACAAAGATATTCTGACGACCTATTCACACGATAAAACTTCGGCGGAACATAAGCAGGCAGCCCTTTTCATTAAACAAAAATTGGATGCTGCAAAATGGTACATCGATGCCATTAACCAAAGACAAAATACTTTGCTGCAAACCATTACTGCAATTGTAAAACTGCAGAAGGATTACTTCATTACTGGTGATGATAAATCATTGAAGCCCATGATTCTGAAAGATGTTGCCGACATCACCGGCTTCGATATTTCTACCATTTCGAGAGTTGTGAAAAGTAAGTATGCCGATACGCCGAATGGAATTGTTTACCTTAAAAATCTCTTCTCGGATTCCCTGACCAATGATGATGGTGAAGAAGTATCAACCAAAGAAATCAAAACTCATTTGATGGATGTAATAGGCAATGAGAACAAAAGAAAGCCGCTTACAGACGATGCTTTGGTAGGTTTGCTGAAAGAAAAAGGGTACAACATCGCACGACGAACAATCGCCAAATATCGCGAGCAACTTAATATTCCTGTAGCGAGATTGAGAAAAGAATTATAA
PROTEIN sequence
Length: 522
LSCAVIIQTKKQHKSDQSPSKEKRKNHIPMLKQNLQIRLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVQDEDKDEDFAGDDDGFETEGTESIDTDFDVDEYIFDDEPAYKTASSNYSADDEEFDNESLLTEGTSLYDYLLEQINLVNIDEEDLKIAEYIIGNLDNDGYLRREIKQIVDDLAFSLGIYTTLEKVTDILENYVQKLDPPGVGARNLQECLLLQIEKRVTADKAVMLAANILRNQFDSLTNKHYNKIIQKYDIEEEDLKDALEVISKLSPKVGGNFDTQTITINQEIIPDFVIQLKENGKKGTDVIALLNSKNAPTLRVSDEYKDILTTYSHDKTSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTITAIVKLQKDYFITGDDKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKNLFSDSLTNDDGEEVSTKEIKTHLMDVIGNENKRKPLTDDALVGLLKEKGYNIARRTIAKYREQLNIPVARLRKEL*