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SCNpilot_cont_500_bf_scaffold_133_126

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 128631..129011

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY2_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 125.0
  • Bit_score: 131
  • Evalue 7.90e-28
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJB08298.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 125.0
  • Bit_score: 131
  • Evalue 1.10e-27
Conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 125.0
  • Bit_score: 129
  • Evalue 9.40e-28

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGTCTGAATTGATCCTCACGACAGCCGAGGTTTGGGGGCGAGCCGTATTGGCTCGGACCGGTTCCATGTGGAAGAGCCCGACAGCGCGCAAGGTCGTTGTGAACGGCTCGCTGATACTAACCTGCGCGGCGTTCGTGCTCGTCTCCCAAGCGCACCCCGCGCACGCGCAGTCCATGCAGAAGCTGGAGCAGGCGGTCGACAAGATCGTGGAATTCTTCACGGGCAAGTTCGGCCGCGGTGTCGGTGCTCTCGCCTTTATCGGCATGTTCCTGTCGGCGGCATTCGGCCTCTGGTCATGGGGCAACTTCCTGAAAGTCGGCGGCGCTGTTGCAGGTGTCTTCGCGTCCGTCGAGATCGTCAATTTCCTAAGCGGAGGCTGA
PROTEIN sequence
Length: 127
MSELILTTAEVWGRAVLARTGSMWKSPTARKVVVNGSLILTCAAFVLVSQAHPAHAQSMQKLEQAVDKIVEFFTGKFGRGVGALAFIGMFLSAAFGLWSWGNFLKVGGAVAGVFASVEIVNFLSGG*