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SCNpilot_cont_500_bf_scaffold_540_28

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(27995..29005)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FI08_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 328.0
  • Bit_score: 302
  • Evalue 6.90e-79
ABC transporter ribose permease {ECO:0000313|EMBL:GAN77431.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 322.0
  • Bit_score: 334
  • Evalue 1.30e-88
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 337.0
  • Bit_score: 291
  • Evalue 3.80e-76

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Taxonomy

Acidisphaera rubrifaciens → Acidisphaera → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATCGGACTGAAGAAGATAGGAATGGCGGTCGCCATGGCGGCGACCGTGCTGACCGGCGGCATCGCCCATGCACAGAACAGCATGAGCGACCCGGCGCGCGCCGGCTACTACGACAATCTGAAGGGCAAGCGCGTCGTCTTCGTGCCTGTCTTCATGGGGCTGGACCTGACCGAGGGATGGTCCAAGATGATGTCGCGGCAAGCCGACAAGCTCGGCTACAAATACGAGGTTCGCAACTCGAACTTCAACACGGCCGCCGGCGCCCAGACCATCACGTCGCTGATCACCGAGAAGCCCGACGTCATCGTCGTGCAGAACCCCGATGTGCAGTCCTATGCCAAGCTGCTTGCCAAGGCCGAGAAGGCCGGCATCCACGTCATCCAGCTCAACATGAAGACCAACGTGCTCACCACCGGTTTCGTCGGCGCCGACGTCGAGGAACTGGGCGAGCTGCAGGCCAAGGAAGTCGTCGCCCATTGCGGATCCGGCACCTCGGGCAAGGTGCTTGTGCTCGCGGGCCCGCCGTCAAGCCCGTTCTCCGCCTACATGCTCAAGGGCTACGAGAACATCCTCAACAAGTCGCCGGAAGTGAAGGTCGTCTCAGTCCAGTCGACCGGCGATTACGAATCCGCCAAGGCCAAGTCGATCACCCAGGTCGTCCTGCAGCAGCACCCTGACCTGTGCGGCGTGCTCGGCGTCTGGGACAATACCGACGTCGGCACCGCAGCAGCGGTCAAGGAAGCAGGCAAGAGCGGCCAGGTGTTCGTCTCGTCCTCTGGCGGCGGCGGCGAGCTGGCCTGCAAGGGCATCGAGGAAGGCATGTGGCAGCACTACGTCAGCTATGACGTGCCCGGCCAGGCGCGCGACCTCAACAACCTGATCCTTGCCGCGCTGCAGGACAAGAACCCGGTCGGCACCACCAAGACGATCCTCTACACGCCGCTGGTGATCTACAACAAGGACAACATCAAGAACCAGTTCTGCTGGACCTTGGACACCATCCGCTGA
PROTEIN sequence
Length: 337
MIGLKKIGMAVAMAATVLTGGIAHAQNSMSDPARAGYYDNLKGKRVVFVPVFMGLDLTEGWSKMMSRQADKLGYKYEVRNSNFNTAAGAQTITSLITEKPDVIVVQNPDVQSYAKLLAKAEKAGIHVIQLNMKTNVLTTGFVGADVEELGELQAKEVVAHCGSGTSGKVLVLAGPPSSPFSAYMLKGYENILNKSPEVKVVSVQSTGDYESAKAKSITQVVLQQHPDLCGVLGVWDNTDVGTAAAVKEAGKSGQVFVSSSGGGGELACKGIEEGMWQHYVSYDVPGQARDLNNLILAALQDKNPVGTTKTILYTPLVIYNKDNIKNQFCWTLDTIR*