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SCNpilot_cont_500_bf_scaffold_942_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(3..239)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase {ECO:0000256|RuleBase:RU003969}; EC=1.1.99.1 {ECO:0000256|RuleBase:RU003969};; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 79.0
  • Bit_score: 72
  • Evalue 3.80e-10
CHDH; choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 83.0
  • Bit_score: 70
  • Evalue 3.20e-10
choline dehydrogenase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B4CA57 similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 79.0
  • Bit_score: 73
  • Evalue 9.30e-11

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Taxonomy

Thalassospira xiamenensis → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
GTGCTGAACACCGCGCGCAAACGCGACCAATACGACTACATCATCGTGGGCGGCGGCTCGGCCGGCGCCGTGGTGGCATCGCGCCTGTCGGAGGACGCCGACGCCACTGTGCTGCTGATCGAGGCCGGGCCGGCCTGGCATGGTCCCACGGTCCGCATGCCGGCCGCCGCCTTCATCGCCATGTCGGGCCAGCGCTACGCCCAGAGCCTCGCGACGCTTCCGCAATCCGGCCTGGCG
PROTEIN sequence
Length: 79
VLNTARKRDQYDYIIVGGGSAGAVVASRLSEDADATVLLIEAGPAWHGPTVRMPAAAFIAMSGQRYAQSLATLPQSGLA