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SCNpilot_cont_500_bf_scaffold_942_14

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(15422..16477)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037E53E9 similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 308.0
  • Bit_score: 422
  • Evalue 4.80e-115
  • rbh
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 307.0
  • Bit_score: 270
  • Evalue 5.60e-70
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABR64014.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 307.0
  • Bit_score: 270
  • Evalue 2.50e-69

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGACACAGGGGTAATCTCGACCAGCCTCCCCATCACTTCCTTCGCGGCGCCGCCCTTGAGATGCGTTGTCGACGTGGATACGTCGGAGGCACCGCCCGCCGAGCAGTTCGACCTTTTTCAGAGCTGGCACGCGGACATCGTTGATGTCGACCTGCTTAGCGGCGAGTTCAGCTCGTTTGCAGCGCGCGAGCGAGCGTGGCAGTTGGGCGACCTCGTTCTGGCTTCGGTGGAATATCCTGGAACCGGTTATCACCGTCGCTGGAGCAGCAAGAAGCATCCGGTCTTCGATCATTGGCTTCTGTGCGTACCGCAAACGATCCCGCCCGGCGGCGGACGCCCCCGGACAGGACGGTTGCGCTGGCATTGCCTGGCCGTCCCACATCAGGATGAGAGCGAGGATGATGGCGTCCTTTGCCTCTTCCTTCCGCGGGATTTCGCGTTCTCCCAGCCCTTGACGCTGGATATCCGTCCAGAGATGGCGGCGTTCGTTTCGGACTACATCCTCCTGCTCTACCATTCTCTTCCGGATCGCACGGAGAACGATGTTGCCTATATCGGCGCGGCGACCGCAAGCCTGCTCGCCGCCTGCGTCTCTCCATCCCGGAACCACATTTTCGAAGCCCAGGAGCCGATCGACGCCGTCATCATGTCGCGCGCGAACAAGTTCATCTCCGCCAGGCTTGCCGATCGAAACCTGACCCCGGAAAAGCTTTGCCAGGAGCTTGGCATCTCACGCTCCCGCCTCTACCGGATCTTCGAGCCGGCCGGGGGCATTTCGCACTACATCCGGCGCCAGCGACTGCTGAAGACAAGGGATGTCCTGGGCGACAGCACGGATGGTCGTCCGATCTCCAGCATCGCGGAGGAATGGGGCTTCGTCGACCCGTCCACCTACAGCCGGACATTCCGGAGGGAATTCGGAATTTCCCCCAAGGAGGCGCGCGAAGCCGGCTGGCTTGGGATCAAGCATGCGCCTCTGTCCGAGCGACAGGGCGACAGCGTATCCTCGCTGAGCGGCCTGCTGGCCAACAACTATCTTGGTCGCCAGCTCTAG
PROTEIN sequence
Length: 352
MDTGVISTSLPITSFAAPPLRCVVDVDTSEAPPAEQFDLFQSWHADIVDVDLLSGEFSSFAARERAWQLGDLVLASVEYPGTGYHRRWSSKKHPVFDHWLLCVPQTIPPGGGRPRTGRLRWHCLAVPHQDESEDDGVLCLFLPRDFAFSQPLTLDIRPEMAAFVSDYILLLYHSLPDRTENDVAYIGAATASLLAACVSPSRNHIFEAQEPIDAVIMSRANKFISARLADRNLTPEKLCQELGISRSRLYRIFEPAGGISHYIRRQRLLKTRDVLGDSTDGRPISSIAEEWGFVDPSTYSRTFRREFGISPKEAREAGWLGIKHAPLSERQGDSVSSLSGLLANNYLGRQL*